RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 NFYAP23511 347 aaPredicted RBP3.17□□□□□ -1.9
SMC5-202ENST00000471372 AQP4P55087 323 aa3.17□□□□□ -1.9
SMC5-202ENST00000471372 TSNQ15631 228 aaKnown RBP3.17□□□□□ -1.9
SMC5-202ENST00000471372 OSTCQ9NRP0 149 aa3.17□□□□□ -1.9
SMC5-202ENST00000471372 ACER3Q9NUN7 267 aa3.17□□□□□ -1.9
SMC5-202ENST00000471372 SLC35A3Q9Y2D2 325 aa3.17□□□□□ -1.9
SMC5-202ENST00000471372 TOPBP1Q92547 1522 aa3.17□□□□□ -1.9
SMC5-202ENST00000471372 GREB1Q4ZG55 1949 aa3.17□□□□□ -1.9
SMC5-202ENST00000471372 KIF1BO60333 1816 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 KIF24Q5T7B8 1368 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 ADGRB3O60242 1522 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 TRGV4A0A0C4DH28 118 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 A0A1B0GV72 72 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 ARRDC5A6NEK1 342 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 J3QQQ9 107 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 PGLYRP1O75594 196 aaPredicted RBP3.16□□□□□ -1.9
SMC5-202ENST00000471372 GLRXP35754 106 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 RPL26P61254 145 aaKnown RBP3.16□□□□□ -1.9
SMC5-202ENST00000471372 RELAQ04206 551 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 TPRXLQ17RH7 258 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 Q6ZTI0 123 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 TRAPPC6BQ86SZ2 158 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 SIGLECL1Q8N7X8 197 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 C11orf40Q8WZ69 217 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 ADAT3Q96EY9 351 aaPredicted RBP3.16□□□□□ -1.9
SMC5-202ENST00000471372 PBDC1Q9BVG4 233 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 RPL26L1Q9UNX3 145 aaKnown RBP3.16□□□□□ -1.9
SMC5-202ENST00000471372 FMN1Q68DA7 1419 aa3.16□□□□□ -1.9
SMC5-202ENST00000471372 SCAF11Q99590 1463 aaKnown RBP3.16□□□□□ -1.9
SMC5-202ENST00000471372 KDM5BQ9UGL1 1544 aa3.15□□□□□ -1.9
SMC5-202ENST00000471372 IGKV1-9A0A0C4DH69 117 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 OR51F1A6NGY5 319 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 HMSDA8MTL9 139 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 GPR31O00270 319 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 CLPSP04118 112 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 TRGC1P0CF51 173 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 FXYD2P54710 66 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 YPEL3P61236 119 aaPredicted RBP3.15□□□□□ -1.91
SMC5-202ENST00000471372 OR8D4Q8NGM9 314 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 STAG3L4Q8TBR4 150 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 LYSMD1Q96S90 227 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 TIMM21Q9BVV7 248 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 IMUPQ9GZP8 106 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 TMEM133Q9H2Q1 129 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 MIXL1Q9H2W2 232 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 MALRD1Q5VYJ5 2156 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 PLXND1Q9Y4D7 1925 aa3.15□□□□□ -1.91
SMC5-202ENST00000471372 ADAMTS7Q9UKP4 1686 aa3.14□□□□□ -1.91
SMC5-202ENST00000471372 CCDC88AQ3V6T2 1871 aa3.14□□□□□ -1.91
SMC5-202ENST00000471372 ZNF705FA8MVS1 300 aaPredicted RBP3.14□□□□□ -1.91
SMC5-202ENST00000471372 CST8O60676 142 aa3.14□□□□□ -1.91
SMC5-202ENST00000471372 SLC38A11Q08AI6 406 aa3.14□□□□□ -1.91
SMC5-202ENST00000471372 RRN3P1Q2M238 152 aa3.14□□□□□ -1.91
SMC5-202ENST00000471372 AKAP14Q86UN6 197 aa3.14□□□□□ -1.91
SMC5-202ENST00000471372 OR5A1Q8NGJ0 315 aa3.14□□□□□ -1.91
SMC5-202ENST00000471372 DOHHQ9BU89 302 aa3.14□□□□□ -1.91
SMC5-202ENST00000471372 A0A087X0T9 212 aa3.13□□□□□ -1.91
SMC5-202ENST00000471372 MEIS3P1A6NDR6 274 aa3.13□□□□□ -1.91
SMC5-202ENST00000471372 AIPO00170 330 aa3.13□□□□□ -1.91
SMC5-202ENST00000471372 IFNA21P01568 189 aa3.13□□□□□ -1.91
SMC5-202ENST00000471372 SHBGP04278 402 aa3.13□□□□□ -1.91
SMC5-202ENST00000471372 CRYGAP11844 174 aa3.13□□□□□ -1.91
SMC5-202ENST00000471372 SLAMF6Q96DU3 332 aa3.13□□□□□ -1.91
SMC5-202ENST00000471372 GPER1Q99527 375 aa3.13□□□□□ -1.91
SMC5-202ENST00000471372 CXCL16Q9H2A7 254 aa3.13□□□□□ -1.91
SMC5-202ENST00000471372 BAIAP2Q9UQB8 552 aa3.13□□□□□ -1.91
SMC5-202ENST00000471372 CPAMD8Q8IZJ3 1885 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 PIAS1O75925 651 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 CSN2P05814 226 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 IFI30P13284 250 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 KHDC3LQ587J8 217 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 LCN15Q6UWW0 184 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 TMEM86AQ8N2M4 240 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 ZNF439Q8NDP4 499 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 DCANP1Q8TF63 244 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 SERPINI1Q99574 410 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 TTTY12Q9BZ98 90 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 CKLFQ9UBR5 152 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 PCTPQ9UKL6 214 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 ANKRD30AQ9BXX3 1397 aa3.12□□□□□ -1.91
SMC5-202ENST00000471372 HEATR5AQ86XA9 2040 aa3.11□□□□□ -1.91
SMC5-202ENST00000471372 GNG14A0A1W2PPG7 69 aa3.11□□□□□ -1.91
SMC5-202ENST00000471372 RIIAD1A6NNX1 92 aa3.11□□□□□ -1.91
SMC5-202ENST00000471372 TAX1BP3O14907 124 aa3.11□□□□□ -1.91
SMC5-202ENST00000471372 CRHP06850 196 aa3.11□□□□□ -1.91
SMC5-202ENST00000471372 DPPA3Q6W0C5 159 aa3.11□□□□□ -1.91
SMC5-202ENST00000471372 TAC4Q86UU9 113 aa3.11□□□□□ -1.91
SMC5-202ENST00000471372 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.11□□□□□ -1.91
SMC5-202ENST00000471372 OR10K1Q8NGX5 313 aa3.11□□□□□ -1.91
SMC5-202ENST00000471372 COL4A2P08572 1712 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 ECM29Q5VYK3 1845 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 LY6LH3BQJ8 138 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 H3BRN7 92 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 C19orf84I3L1E1 186 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 HTR1AP08908 422 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 EIF5AP63241 154 aaKnown RBP3.1□□□□□ -1.91
SMC5-202ENST00000471372 TFAMQ00059 246 aaKnown RBP3.1□□□□□ -1.91
SMC5-202ENST00000471372 FAM24BQ8N5W8 94 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 WFDC11Q8NEX6 87 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 OR10J5Q8NHC4 309 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms