RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 IGLV2-14P01704 120 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 MBPP02686 304 aaPredicted RBP10.36□□□□□ -0.75
HMGN1-211ENST00000471260 OR9G9P0C7N8 305 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 SPP1P10451 314 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 SLC25A6P12236 298 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 GP9P14770 177 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 BAXQ07812 192 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 TNXAQ16473 311 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 FAM74A3Q4VXF1 159 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 ZNF343Q6P1L6 599 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 ZNF66Q6ZN08 573 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 OR4S2Q8NH73 311 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 VSTM2AQ8TAG5 236 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 SRSF12Q8WXF0 261 aaKnown RBP10.36□□□□□ -0.75
HMGN1-211ENST00000471260 TMEM222Q9H0R3 208 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 PRR13Q9NZ81 148 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 PEF1Q9UBV8 284 aaKnown RBP10.36□□□□□ -0.75
HMGN1-211ENST00000471260 U3KQK5 164 aa10.36□□□□□ -0.75
HMGN1-211ENST00000471260 FAM223BA6NKX1 122 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 UMAD1C9J7I0 102 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 H0Y980 276 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 SAA1P0DJI8 122 aaPredicted RBP10.35□□□□□ -0.75
HMGN1-211ENST00000471260 LPAR6P43657 344 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 KLF5Q13887 457 aaPredicted RBP10.35□□□□□ -0.75
HMGN1-211ENST00000471260 PEA15Q15121 130 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 FAM209BQ5JX69 171 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 Q6ZRG5 221 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 FAM223AQ8IWN6 122 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 ZBTB34Q8NCN2 500 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 GLYATL2Q8WU03 294 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 PBDC1Q9BVG4 233 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 SLC25A31Q9H0C2 315 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 ZNF430Q9H8G1 570 aaPredicted RBP10.35□□□□□ -0.75
HMGN1-211ENST00000471260 COA4Q9NYJ1 87 aa10.35□□□□□ -0.75
HMGN1-211ENST00000471260 TRBV9A0A0B4J1U6 114 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 IGKV1D-13A0A0B4J2D9 117 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 C3orf85A0A1B0GTC6 90 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 MPPED1O15442 326 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 IGLV1-51P01701 117 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 IGKV1-13P0DP09 117 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 UCP1P25874 307 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 MAS1LP35410 378 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 KIR2DS2P43631 304 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 FXYD4P59646 89 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 RPL30P62888 115 aaKnown RBP10.34□□□□□ -0.75
HMGN1-211ENST00000471260 EIF4EBP1Q13541 118 aaPredicted RBP10.34□□□□□ -0.75
HMGN1-211ENST00000471260 TTC9CQ8N5M4 171 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 OR9G4Q8NGQ1 327 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 HIPK2Q9H2X6 1198 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 C11orf1Q9H5F2 150 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 SIGLEC8Q9NYZ4 499 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 COL7A1Q02388 2944 aa10.34□□□□□ -0.75
HMGN1-211ENST00000471260 SCGB1D2O95969 90 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 HRASP01112 189 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 SFTA3P0C7M3 94 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 FOLR2P14207 255 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 GUCA2BQ16661 112 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 PHLDA2Q53GA4 152 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 DPPA3Q6W0C5 159 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 FAM219AQ8IW50 185 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 CMTM1Q8IZ96 169 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 SLC35G3Q8N808 338 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 TMEM167AQ8TBQ9 72 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 TCTEX1D2Q8WW35 142 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 HRH4Q9H3N8 390 aa10.33□□□□□ -0.76
HMGN1-211ENST00000471260 RCL1Q9Y2P8 373 aaKnown RBP10.33□□□□□ -0.76
HMGN1-211ENST00000471260 KBTBD11O94819 623 aa10.32□□□□□ -0.76
HMGN1-211ENST00000471260 SNCAP37840 140 aa10.32□□□□□ -0.76
HMGN1-211ENST00000471260 NKX2-1P43699 371 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-211ENST00000471260 RPEL1Q2QD12 228 aa10.32□□□□□ -0.76
HMGN1-211ENST00000471260 LYZL2Q7Z4W2 148 aa10.32□□□□□ -0.76
HMGN1-211ENST00000471260 C15orf54Q8N8G6 183 aa10.32□□□□□ -0.76
HMGN1-211ENST00000471260 NECAP1Q8NC96 275 aa10.32□□□□□ -0.76
HMGN1-211ENST00000471260 DMBX1Q8NFW5 382 aa10.32□□□□□ -0.76
HMGN1-211ENST00000471260 SMCO4Q9NRQ5 59 aa10.32□□□□□ -0.76
HMGN1-211ENST00000471260 LYRM2Q9NU23 88 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-211ENST00000471260 ZNF257Q9Y2Q1 563 aa10.32□□□□□ -0.76
HMGN1-211ENST00000471260 RBFOX2O43251 390 aaKnown RBP eCLIP10.31□□□□□ -0.761e-18■□□□□ 8.3
HMGN1-211ENST00000471260 APELAP0DMC3 54 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 GNRHRP30968 328 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 CAMLGP49069 296 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 BRWD1-AS2P59051 145 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 RHOGP84095 191 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 EWSR1Q01844 656 aaKnown RBP eCLIP10.31□□□□□ -0.76
HMGN1-211ENST00000471260 ATP5G2Q06055 141 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 RHEBQ15382 184 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 NMSQ5H8A3 153 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 OR2B11Q5JQS5 317 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 TBC1D26Q86UD7 250 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 OR2C3Q8N628 320 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 OR4A5Q8NH83 315 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 SECTM1Q8WVN6 248 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 GNPNAT1Q96EK6 184 aaPredicted RBP10.31□□□□□ -0.76
HMGN1-211ENST00000471260 TP53RKQ96S44 253 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 ASCL2Q99929 193 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 TUBA4BQ9H853 241 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 PEMTQ9UBM1 199 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 MLXQ9UH92 298 aa10.31□□□□□ -0.76
HMGN1-211ENST00000471260 NPIPB5A8MRT5 1133 aa10.3□□□□□ -0.76
HMGN1-211ENST00000471260 A8MZ25 164 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms