RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 DLK1P80370 383 aa13.9□□□□□ -0.18
MRPL28-208ENST00000469744 HES1Q14469 280 aa13.9□□□□□ -0.18
MRPL28-208ENST00000469744 HNF4GQ14541 408 aa13.9□□□□□ -0.18
MRPL28-208ENST00000469744 C9orf152Q5JTZ5 239 aa13.9□□□□□ -0.18
MRPL28-208ENST00000469744 OR5AN1Q8NGI8 311 aa13.9□□□□□ -0.18
MRPL28-208ENST00000469744 OR10G4Q8NGN3 311 aa13.9□□□□□ -0.18
MRPL28-208ENST00000469744 HEYLQ9NQ87 328 aaPredicted RBP13.9□□□□□ -0.18
MRPL28-208ENST00000469744 WDR83OSQ9Y284 106 aa13.9□□□□□ -0.18
MRPL28-208ENST00000469744 TRAV3A0A0B4J244 114 aa13.89□□□□□ -0.19
MRPL28-208ENST00000469744 A0A1W2PRX2 142 aa13.89□□□□□ -0.19
MRPL28-208ENST00000469744 FAM74A7A6NL05 159 aa13.89□□□□□ -0.19
MRPL28-208ENST00000469744 ADARB2-AS1A8MUL3 147 aa13.89□□□□□ -0.19
MRPL28-208ENST00000469744 FAM106CPP0CH98 169 aa13.89□□□□□ -0.19
MRPL28-208ENST00000469744 IL3RAP26951 378 aa13.89□□□□□ -0.19
MRPL28-208ENST00000469744 FAM74A3Q4VXF1 159 aa13.89□□□□□ -0.19
MRPL28-208ENST00000469744 TMEM177Q53S58 311 aa13.89□□□□□ -0.19
MRPL28-208ENST00000469744 VKORC1L1Q8N0U8 176 aa13.89□□□□□ -0.19
MRPL28-208ENST00000469744 OR5AU1Q8NGC0 362 aa13.89□□□□□ -0.19
MRPL28-208ENST00000469744 IGHV3-72A0A0B4J1Y9 119 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 FNDC10F2Z333 226 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 IFNA10P01566 189 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 OPN1MWP04001 364 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 OPN1MW2P0DN77 364 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 OPN1MW3P0DN78 364 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 NPBWR1P48145 328 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 C10orf99Q6UWK7 81 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 PDPNQ86YL7 162 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 ZNF709Q8N972 641 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 OR4A5Q8NH83 315 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 ST6GALNAC6Q969X2 333 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 RCC1LQ96I51 464 aaKnown RBP13.88□□□□□ -0.19
MRPL28-208ENST00000469744 ENY2Q9NPA8 101 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 MOB4Q9Y3A3 225 aa13.88□□□□□ -0.19
MRPL28-208ENST00000469744 PRSS46E5RG02 174 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 H0YJW9 148 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 TSPAN4O14817 238 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 IGKV1D-33P01593 117 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 IGKV1-33P01594 117 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 SRP19P09132 144 aaKnown RBP13.87□□□□□ -0.19
MRPL28-208ENST00000469744 TMEM11P17152 192 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 HOXA1P49639 335 aaPredicted RBP13.87□□□□□ -0.19
MRPL28-208ENST00000469744 SPINK9Q5DT21 86 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 ETV3LQ6ZN32 361 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 MOB3BQ86TA1 216 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 NDUFA11Q86Y39 141 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 NPCDR1Q9BY65 106 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 IGHV1-3A0A0C4DH29 117 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 LOC102723971A0A1B0GUV8 181 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 G3V4G9 280 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 KBTBD11O94819 623 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 CD1BP29016 333 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 TAGLN2P37802 199 aaKnown RBP13.87□□□□□ -0.19
MRPL28-208ENST00000469744 PRCDQ00LT1 54 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 ICAM4Q14773 271 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 ZNF726P1Q15940 193 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 TCTEX1D4Q5JR98 221 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 RARRES2Q99969 163 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 NABP2Q9BQ15 211 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 MRPL20Q9BYC9 149 aaKnown RBP13.87□□□□□ -0.19
MRPL28-208ENST00000469744 VSIRQ9H7M9 311 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 OR51B2Q9Y5P1 312 aa13.87□□□□□ -0.19
MRPL28-208ENST00000469744 CTXND1A0A1B0GTU2 59 aa13.86□□□□□ -0.19
MRPL28-208ENST00000469744 INS-IGF2F8WCM5 200 aa13.86□□□□□ -0.19
MRPL28-208ENST00000469744 H7C2Y5 167 aa13.86□□□□□ -0.19
MRPL28-208ENST00000469744 IFNA1P01562 189 aa13.86□□□□□ -0.19
MRPL28-208ENST00000469744 MC5RP33032 325 aa13.86□□□□□ -0.19
MRPL28-208ENST00000469744 SOHLH1Q5JUK2 328 aa13.86□□□□□ -0.19
MRPL28-208ENST00000469744 ACSM6Q6P461 480 aa13.86□□□□□ -0.19
MRPL28-208ENST00000469744 OR5B3Q8NH48 314 aa13.86□□□□□ -0.19
MRPL28-208ENST00000469744 VSTM2AQ8TAG5 236 aa13.86□□□□□ -0.19
MRPL28-208ENST00000469744 P2RX4Q99571 388 aa13.86□□□□□ -0.19
MRPL28-208ENST00000469744 A0A1B0GV50 99 aa13.85□□□□□ -0.19
MRPL28-208ENST00000469744 MAP1LC3B2A6NCE7 125 aa13.85□□□□□ -0.19
MRPL28-208ENST00000469744 M0QZK8 103 aa13.85□□□□□ -0.19
MRPL28-208ENST00000469744 RRHO14718 337 aa13.85□□□□□ -0.19
MRPL28-208ENST00000469744 NPY1RP25929 384 aa13.85□□□□□ -0.19
MRPL28-208ENST00000469744 ACOT6Q3I5F7 207 aaPredicted RBP13.85□□□□□ -0.19
MRPL28-208ENST00000469744 C5orf56Q8N8D9 126 aa13.85□□□□□ -0.19
MRPL28-208ENST00000469744 SLC24A4Q8NFF2 622 aa13.85□□□□□ -0.19
MRPL28-208ENST00000469744 ACTR3CQ9C0K3 210 aaPredicted RBP13.85□□□□□ -0.19
MRPL28-208ENST00000469744 MAP1LC3BQ9GZQ8 125 aa13.85□□□□□ -0.19
MRPL28-208ENST00000469744 SMCO4Q9NRQ5 59 aa13.85□□□□□ -0.19
MRPL28-208ENST00000469744 KCNIP2Q9NS61 270 aa13.85□□□□□ -0.19
MRPL28-208ENST00000469744 SLC39A9Q9NUM3 307 aa13.85□□□□□ -0.19
MRPL28-208ENST00000469744 LOC105371267A0A1B0GV96 52 aa13.84□□□□□ -0.19
MRPL28-208ENST00000469744 SRRM4A7MD48 611 aaKnown RBP13.84□□□□□ -0.19
MRPL28-208ENST00000469744 CYB5BO43169 146 aa13.84□□□□□ -0.19
MRPL28-208ENST00000469744 BCL2P10415 239 aa13.84□□□□□ -0.19
MRPL28-208ENST00000469744 ELLP55199 621 aaPredicted RBP13.84□□□□□ -0.19
MRPL28-208ENST00000469744 RHEBQ15382 184 aa13.84□□□□□ -0.19
MRPL28-208ENST00000469744 HAGHQ16775 308 aa13.84□□□□□ -0.19
MRPL28-208ENST00000469744 FFAR4Q5NUL3 377 aa13.84□□□□□ -0.19
MRPL28-208ENST00000469744 RPP25LQ8N5L8 163 aaKnown RBP13.84□□□□□ -0.19
MRPL28-208ENST00000469744 OR10G9Q8NGN4 311 aa13.84□□□□□ -0.19
MRPL28-208ENST00000469744 OR10G7Q8NGN6 311 aa13.84□□□□□ -0.19
MRPL28-208ENST00000469744 FLYWCH2Q96CP2 140 aaKnown RBP13.84□□□□□ -0.19
MRPL28-208ENST00000469744 TUBA4BQ9H853 241 aa13.84□□□□□ -0.19
MRPL28-208ENST00000469744 PLEKHA3Q9HB20 300 aa13.84□□□□□ -0.19
MRPL28-208ENST00000469744 WASHC3Q9Y3C0 194 aa13.84□□□□□ -0.19
MRPL28-208ENST00000469744 PRKDCP78527 4128 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms