RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 K7ERU9 68 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 OR7C2O60412 319 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 CRYGCP07315 174 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 PPOXP50336 477 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 RHOGP84095 191 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 MORN5Q5VZ52 161 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 TMEM45BQ96B21 275 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 GALMQ96C23 342 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 RNF212BA8MTL3 300 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 PRSS46E5RG02 174 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 FOXF2Q12947 444 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 LRRC10Q5BKY1 277 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 C19orf35Q6ZS72 473 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 OR8B3Q8NGG8 313 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 TACC2O95359 2948 aa6.54□□□□□ -1.36
TPM3-215ENST00000469717 IGHV1-45A0A0A0MS14 117 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 C9JCJ5 164 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 CATR1Q13166 79 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 TBR1Q16650 682 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 RPL39P5Q59GN2 51 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 TRAT1Q6PIZ9 186 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 SHISA2Q6UWI4 295 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 MED13Q9UHV7 2174 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 TRAV9-1A0A075B6T8 112 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 TRBV9A0A0B4J1U6 114 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 HLA-DQA1P01909 254 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 MT-ND6P03923 174 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 COX6A1P12074 109 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 OR10W1Q8NGF6 305 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 OR13A1Q8NGR1 328 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 LEAP2Q969E1 77 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 C11orf52Q96A22 123 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 COQ2Q96H96 371 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 SCNM1Q9BWG6 230 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 PRO3102Q9H379 93 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 WDR54Q9H977 334 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 TNRC6BQ9UPQ9 1833 aaKnown RBP6.53□□□□□ -1.36
TPM3-215ENST00000469717 ZGRF1Q86YA3 2104 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 FLNBO75369 2602 aaKnown RBP6.53□□□□□ -1.36
TPM3-215ENST00000469717 ABCA2Q9BZC7 2435 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 TRAV5A0A0B4J249 113 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 J3QT63 122 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 TNRC18O15417 2968 aaPredicted RBP6.53□□□□□ -1.36
TPM3-215ENST00000469717 UQCRFS1P47985 274 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 RHOBP62745 196 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 TIGITQ495A1 244 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 ZNF331Q9NQX6 463 aaPredicted RBP6.53□□□□□ -1.36
TPM3-215ENST00000469717 BOKQ9UMX3 212 aaPredicted RBP6.53□□□□□ -1.36
TPM3-215ENST00000469717 IGKV1OR2-108A0A075B7D4 117 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 PRR33A8MZF0 331 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 EDDM3AQ14507 147 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 GABRA6Q16445 453 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 FAM120AOSQ5T036 256 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 MRPL14Q6P1L8 145 aaKnown RBP6.53□□□□□ -1.36
TPM3-215ENST00000469717 OR5B3Q8NH48 314 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 NINJ1Q92982 152 aa6.53□□□□□ -1.36
TPM3-215ENST00000469717 PPIAL4DF5H284 164 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 HAND1O96004 215 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 OR1C1Q15619 314 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 TMEM249Q2WGJ8 235 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 C1orf229Q6ZS94 237 aaPredicted RBP6.52□□□□□ -1.37
TPM3-215ENST00000469717 ZADH2Q8N4Q0 377 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 IMMP1LQ96LU5 166 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 FNDC4Q9H6D8 234 aaPredicted RBP6.52□□□□□ -1.37
TPM3-215ENST00000469717 LSM4Q9Y4Z0 139 aaKnown RBP6.52□□□□□ -1.37
TPM3-215ENST00000469717 TLN2Q9Y4G6 2542 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 PIGBOS1A0A0B4J2F0 54 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 SMIM27A0A1W2PRY6 76 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 LINC00869P0C866 280 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 VDAC2P45880 294 aaPredicted RBP6.52□□□□□ -1.37
TPM3-215ENST00000469717 PNKDQ8N490 385 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 NUP35Q8NFH5 326 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 OR4A16Q8NH70 328 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 HES7Q9BYE0 225 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 SH2D2AQ9NP31 389 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 KCNIP1Q9NZI2 227 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 IGHV3-48P01763 117 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 MOB1BQ7L9L4 216 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 SSX8Q7RTT4 187 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 DEFB125Q8N687 156 aa6.52□□□□□ -1.37
TPM3-215ENST00000469717 ATMQ13315 3056 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 C9orf172C9J069 976 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 SS18L1O75177 396 aaPredicted RBP6.51□□□□□ -1.37
TPM3-215ENST00000469717 ARR3P36575 388 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 ZNF137PP52743 207 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 SRSF6Q13247 344 aaKnown RBP6.51□□□□□ -1.37
TPM3-215ENST00000469717 TCF24Q7RTU0 167 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 LINC00596Q86U02 117 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 KLF13Q9Y2Y9 288 aaPredicted RBP6.51□□□□□ -1.37
TPM3-215ENST00000469717 LAMA5O15230 3695 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 ZNF462Q96JM2 2506 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 LRRK2Q5S007 2527 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 TRGV8A0A0C4DH27 118 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 GJE1A6NN92 205 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 B9A039 149 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 KLRC4-KLRK1H3BQV0 150 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 KLF7O75840 302 aaPredicted RBP6.51□□□□□ -1.37
TPM3-215ENST00000469717 ERVK11-1P61568 191 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 TEPPQ6URK8 271 aa6.51□□□□□ -1.37
TPM3-215ENST00000469717 ASCL5Q7RTU5 278 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms