RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 IFNA17P01571 189 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 CSN3P07498 182 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 OR9G9P0C7N8 305 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 HLA-GP17693 338 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 ZP3P21754 424 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 CNTFRP26992 372 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 SNCAP37840 140 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 MYCNOSP40205 109 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 LPAR6P43657 344 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 CDX1P47902 265 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-208ENST00000469585 RAB9AP51151 201 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 FAM219AQ8IW50 185 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 FAM223AQ8IWN6 122 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 SLC35G3Q8N808 338 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 OR1L8Q8NGR8 309 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 SRSF12Q8WXF0 261 aaKnown RBP4.82□□□□□ -1.64
PTCD3-208ENST00000469585 UBE2E2Q96LR5 201 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 HSPB9Q9BQS6 159 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 SLC25A21Q9BQT8 299 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-208ENST00000469585 C7orf50Q9BRJ6 194 aaKnown RBP4.82□□□□□ -1.64
PTCD3-208ENST00000469585 ZNF430Q9H8G1 570 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-208ENST00000469585 SLC2A9Q9NRM0 540 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 PLSCR3Q9NRY6 295 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 BET1LQ9NYM9 111 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 ANAPC10Q9UM13 185 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 ZNF257Q9Y2Q1 563 aa4.82□□□□□ -1.64
PTCD3-208ENST00000469585 ANKRD20A5PA0PJZ0 165 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 CCL24O00175 119 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 CD74P04233 296 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 CTSDP07339 412 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-208ENST00000469585 TRAPPC2P0DI81 140 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 TRAPPC2BP0DI82 140 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 AKR1C4P17516 323 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 DEFA1P59665 94 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 DEFA3P59666 94 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 RND3P61587 244 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 ERHP84090 104 aaKnown RBP4.81□□□□□ -1.64
PTCD3-208ENST00000469585 ATP5G2Q06055 141 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 ZNF616Q08AN1 781 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 RPEL1Q2QD12 228 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 OR4A47Q6IF82 309 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 TMED4Q7Z7H5 227 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 OR5T1Q8NG75 326 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 OR51S1Q8NGJ8 323 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 OR4C16Q8NGL9 310 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 OR13C8Q8NGS7 320 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 OR5B3Q8NH48 314 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 TMEM167AQ8TBQ9 72 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 MARCH1Q8TCQ1 289 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 PHLDA1Q8WV24 401 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-208ENST00000469585 LSM10Q969L4 123 aaKnown RBP4.81□□□□□ -1.64
PTCD3-208ENST00000469585 EEF1AKMT3Q96AZ1 226 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 CXorf58Q96LI9 332 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 FAM103A1Q9BTL3 118 aaKnown RBP4.81□□□□□ -1.64
PTCD3-208ENST00000469585 NXF2Q9GZY0 626 aaKnown RBP4.81□□□□□ -1.64
PTCD3-208ENST00000469585 FXYD6Q9H0Q3 95 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 MIXL1Q9H2W2 232 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 PLEKHA3Q9HB20 300 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 OR51B2Q9Y5P1 312 aa4.81□□□□□ -1.64
PTCD3-208ENST00000469585 LINC01619G3V211 115 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 G3V318 75 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 S1PR2O95136 353 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 IFNA21P01568 189 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 HSPB1P04792 205 aaKnown RBP4.8□□□□□ -1.64
PTCD3-208ENST00000469585 LGALS1P09382 135 aaKnown RBP4.8□□□□□ -1.64
PTCD3-208ENST00000469585 PSMB8P28062 276 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 BMI1P35226 326 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 G6PCP35575 357 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 INSL3P51460 131 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 CRIP2P52943 208 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-208ENST00000469585 KIAA1644Q3SXP7 199 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 C9orf66Q5T8R8 295 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 LINC00299Q6ZSB3 139 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 VKORC1L1Q8N0U8 176 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 LGI3Q8N145 548 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 MINDY2Q8NBR6 621 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 NECAP1Q8NC96 275 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 OR11H1Q8NG94 326 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 OR1N2Q8NGR9 330 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 OR5B12Q96R08 314 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 OR4C12Q96R67 309 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 CCDC32Q9BV29 185 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 Q9H8V8 135 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 WDR83OSQ9Y284 106 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 TMED3Q9Y3Q3 217 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 NUBP2Q9Y5Y2 271 aa4.8□□□□□ -1.64
PTCD3-208ENST00000469585 TRBV7-1A0A0A6YYK4 115 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 CORTO00230 105 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 WRBO00258 174 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 UPK2O00526 184 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 FCN1O00602 326 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 RAMP3O60896 148 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 MED6O75586 246 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 IGLV2-23P01705 113 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 AMBPP02760 352 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 APELAP0DMC3 54 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 ETV6P41212 452 aa4.79□□□□□ -1.64
PTCD3-208ENST00000469585 UBE2MP61081 183 aaKnown RBP4.79□□□□□ -1.64
PTCD3-208ENST00000469585 RPL30P62888 115 aaKnown RBP4.79□□□□□ -1.64
PTCD3-208ENST00000469585 RHOGP84095 191 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms