RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SMIM20Q8N5G0 67 aa10.21□□□□□ -0.78
USP11-206ENST00000469080 GP6Q9HCN6 339 aa10.21□□□□□ -0.78
USP11-206ENST00000469080 TRAV9-2A0A087WT02 112 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 FOXI3A8MTJ6 420 aaPredicted RBP10.2□□□□□ -0.78
USP11-206ENST00000469080 SYNGR2O43760 224 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 ZG16O60844 167 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 GATA3P23771 443 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 CFPP27918 469 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 CA7P43166 264 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 C12orf54Q6X4T0 127 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 TCF24Q7RTU0 167 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 PIP4P1Q86T03 277 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 GNB4Q9HAV0 340 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 RAXQ9Y2V3 346 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 SNURFLB1AK76 121 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 H3BUT2 72 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 ACTL6BO94805 426 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 KITLGP21583 273 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 CATR1Q13166 79 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 UTF1Q5T230 341 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 OR4A16Q8NH70 328 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 C19orf24Q9BVV8 132 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 PGPEP1Q9NXJ5 209 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 GAGE12HA6NDE8 117 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 PGPEP1LA6NFU8 196 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 CCDC144NLQ6NUI1 221 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 HAPLN4Q86UW8 402 aa10.2□□□□□ -0.78
USP11-206ENST00000469080 TRBV7-9A0A0J9YWB2 115 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 TEX48A0A1B0GUV7 120 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 SIVA1O15304 175 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 SS18L1O75177 396 aaPredicted RBP10.19□□□□□ -0.78
USP11-206ENST00000469080 NAPSAO96009 420 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 COL8A2P25067 703 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 CD1BP29016 333 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 THBS3P49746 956 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 SSMEM1Q8WWF3 244 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 MRAP2Q96G30 205 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 CLEC7AQ9BXN2 247 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 WDR61Q9GZS3 305 aaKnown RBP10.19□□□□□ -0.78
USP11-206ENST00000469080 MDFIC2A0A1B0GVS7 189 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 C1QTNF9P0C862 333 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 PMCHL1Q16048 86 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 PSG3Q16557 428 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 PCSK4Q6UW60 755 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 RBMXL3Q8N7X1 1067 aaKnown RBP10.19□□□□□ -0.78
USP11-206ENST00000469080 GATAD1Q8WUU5 269 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 RAB37Q96AX2 223 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 DKK4Q9UBT3 224 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 A0A087X0K7 114 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 C1QTNF9BB2RNN3 333 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 ERVK-16P61578 105 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 TMEM249Q2WGJ8 235 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 ACP7Q6ZNF0 438 aa10.19□□□□□ -0.78
USP11-206ENST00000469080 SRSF8Q9BRL6 282 aaKnown RBP10.19□□□□□ -0.78
USP11-206ENST00000469080 LIN7CQ9NUP9 197 aaKnown RBP10.19□□□□□ -0.78
USP11-206ENST00000469080 COL5A1P20908 1838 aaPredicted RBP10.18□□□□□ -0.78
USP11-206ENST00000469080 CD5LO43866 347 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 CA2P00918 260 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 LY6DQ14210 128 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 SPACA3Q8IXA5 215 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 PPP1R35Q8TAP8 253 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 CEACAM18A8MTB9 384 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 ADH4P08319 380 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 CCL3L1P16619 93 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 ID1P41134 155 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 SEM1Q6ZVN7 128 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 ABHD12Q8N2K0 398 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 CD177Q8N6Q3 437 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 NAT8BQ9UHF3 227 aa10.18□□□□□ -0.78
USP11-206ENST00000469080 SNAI2O43623 268 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 COX7A1P24310 79 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 Q6P435 159 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 PRR7Q8TB68 274 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 COQ2Q96H96 371 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 ENY2Q9NPA8 101 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 FAM215AQ9Y5M1 114 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 C17orf112F2Z3M2 114 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 C16orf97H3BN30 126 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 WNT2P09544 360 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 BSPH1Q075Z2 132 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 SLC38A11Q08AI6 406 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 SPATA31B1PQ5VZV4 182 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 OR2K2Q8NGT1 345 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 PSMG3Q9BT73 122 aaPredicted RBP10.17□□□□□ -0.78
USP11-206ENST00000469080 DSCAMO60469 2012 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 GFRA3O60609 400 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 GNB1P62873 340 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 ZNF726P1Q15940 193 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 PRR31Q5SQ13 230 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 ZNF324BQ6AW86 544 aaPredicted RBP10.17□□□□□ -0.78
USP11-206ENST00000469080 Q8IYB0 196 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 RCHY1Q96PM5 261 aa10.17□□□□□ -0.78
USP11-206ENST00000469080 SSBP4Q9BWG4 385 aaPredicted RBP10.17□□□□□ -0.78
USP11-206ENST00000469080 HCFC1P51610 2035 aa10.16□□□□□ -0.78
USP11-206ENST00000469080 TRAV1-1A0A0B4J248 108 aa10.16□□□□□ -0.78
USP11-206ENST00000469080 DAZAP2Q15038 168 aaPredicted RBP10.16□□□□□ -0.78
USP11-206ENST00000469080 CD300EQ496F6 205 aaPredicted RBP10.16□□□□□ -0.78
USP11-206ENST00000469080 SLC25A34Q6PIV7 304 aa10.16□□□□□ -0.78
USP11-206ENST00000469080 C18orf12Q96KH6 178 aa10.16□□□□□ -0.78
USP11-206ENST00000469080 OR4C12Q96R67 309 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms