RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 BAHCC1Q9P281 2608 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 NOTCH2Q04721 2471 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 IGHV3-21A0A0B4J1V1 117 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 IGHV7-81A0A0B4J1V7 117 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 A0A1W2PN81 502 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 E5RGE8 158 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 ARPC5O15511 151 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 GPR137BO60478 399 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 TSC22D2O75157 780 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 DEDDO75618 318 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 CST7O76096 145 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 NDUFA3O95167 84 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 PRH1P02810 166 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 IFNA4P05014 189 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 CRYBA1P05813 215 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 OR8U8P0C7N1 319 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 METTL15P1P0C7V9 234 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 PET100P0DJ07 73 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 SLC25A4P12235 298 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 DEFA4P12838 97 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 MAS1LP35410 378 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 CHRNA7P36544 502 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 SNCAP37840 140 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 COMPP49747 757 aaPredicted RBP3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 PAX9P55771 341 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 PRCDQ00LT1 54 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 TNFRSF9Q07011 255 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 TMEM267Q0VDI3 215 aaPredicted RBP3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 IL15RAQ13261 267 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 SCGB2A2Q13296 93 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 AANATQ16613 207 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 ECSCRQ19T08 205 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 OR8G2PQ6IF36 304 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 PRSS54Q6PEW0 395 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 UNQ5815/PRO19632Q6UWF5 114 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 ZNF562Q6V9R5 426 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 Q6ZSV7 163 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 SLC35E3Q7Z769 313 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 NOXA1Q86UR1 476 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 TCTE3Q8IZS6 198 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 C5orf56Q8N8D9 126 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 Q8N9P0 234 aaPredicted RBP3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 INO80EQ8NBZ0 244 aaPredicted RBP3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 LFNGQ8NES3 379 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 OR11H4Q8NGC9 324 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 OR52E5Q8NH55 327 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 SRSF12Q8WXF0 261 aaKnown RBP3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 ARPC1AQ92747 370 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 BSCL2Q96G97 398 aaPredicted RBP3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 SMIM8Q96KF7 97 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 NOL4LQ96MY1 436 aaPredicted RBP3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 MS4A10Q96PG2 267 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 RAB40CQ96S21 281 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 MFFQ9GZY8 342 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 NDUFA4L2Q9NRX3 87 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 ZFP57Q9NU63 452 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 COA4Q9NYJ1 87 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 VPREB3Q9UKI3 123 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 FOXA2Q9Y261 457 aaPredicted RBP3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 STRAPQ9Y3F4 350 aaKnown RBP3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 MAP1AP78559 2803 aaPredicted RBP3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 ITPR3Q14573 2671 aa3.2□□□□□ -1.9
TMEM39A-204ENST00000468545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.19□□□□□ -1.99e-8■■■■■ 35.1
TMEM39A-204ENST00000468545 CSPG4Q6UVK1 2322 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 MYO9AB2RTY4 2548 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 A0A1B0GW64 132 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 IGSF23A1L1A6 192 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 SMCO3A2RU48 225 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 FAM90A26D6RGX4 464 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 G3V318 75 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 G3V3Q6 166 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 TRIM77I1YAP6 450 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 M0QZK8 103 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 ATP6V0E1O15342 81 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 FGF16O43320 207 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 CRLF1O75462 422 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 TMEM50AO95807 157 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 IGHV3-48P01763 117 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 HLA-DRB1P01911 266 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 C1QBP02746 253 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 AREGP15514 252 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 CXCL2P19875 107 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 RPL12P30050 165 aaKnown RBP3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 VDAC2P45880 294 aaPredicted RBP3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 P2RY1P47900 373 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 SUB1P53999 127 aaKnown RBP eCLIP3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 RAB11AP62491 216 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 NDPQ00604 133 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 DEFA5Q01523 94 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 WT1-ASQ06250 92 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 CLINT1Q14677 625 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 LGALSLQ3ZCW2 172 aaPredicted RBP3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 C9orf47Q6ZRZ4 202 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 TMUB2Q71RG4 321 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 C16orf82Q7Z2V1 217 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 CENPVQ7Z7K6 275 aaPredicted RBP3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 ZNF429Q86V71 674 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 LURAP1LQ8IV03 231 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 TMEM252Q8N6L7 170 aa3.19□□□□□ -1.9
TMEM39A-204ENST00000468545 OR5B3Q8NH48 314 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms