RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 CYTL1Q9NRR1 136 aa9.44□□□□□ -0.9
CTNS-205ENST00000467663 THYN1Q9P016 225 aa9.44□□□□□ -0.9
CTNS-205ENST00000467663 KLK9Q9UKQ9 250 aa9.44□□□□□ -0.9
CTNS-205ENST00000467663 PAIP2BQ9ULR5 123 aaKnown RBP9.44□□□□□ -0.9
CTNS-205ENST00000467663 BOLA1Q9Y3E2 137 aa9.44□□□□□ -0.9
CTNS-205ENST00000467663 F11RQ9Y624 299 aaKnown RBP9.44□□□□□ -0.9
CTNS-205ENST00000467663 E7EUB6 86 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 BRI3O95415 125 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 IGHG2P01859 326 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 SEC11BP0C7V7 166 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 MYOD1P15172 320 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 CTRB1P17538 263 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 C9orf152Q5JTZ5 239 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 C10orf55Q5SWW7 151 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 CTRB2Q6GPI1 263 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 OR8G2PQ6IF36 304 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 TMEM217Q8N7C4 229 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 WFDC9Q8NEX5 89 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 OR10W1Q8NGF6 305 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 OR4X2Q8NGF9 303 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 ABHD5Q8WTS1 349 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 P2RX4Q99571 388 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 GINS3Q9BRX5 216 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 NPVFQ9HCQ7 196 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 KCNIP2Q9NS61 270 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 UQCC1Q9NVA1 299 aa9.43□□□□□ -0.9
CTNS-205ENST00000467663 TSSC4Q9Y5U2 329 aaPredicted RBP9.43□□□□□ -0.9
CTNS-205ENST00000467663 A0A1B0GW64 132 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 TCRBV4S1A1TA0A5B7 111 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 PRSS46E5RG02 174 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 H3BUA1 57 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 IGF1P05019 195 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 RAB5CP51148 216 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 CD69Q07108 199 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 RAB31Q13636 194 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 RPL7L1Q6DKI1 246 aaKnown RBP9.42□□□□□ -0.9
CTNS-205ENST00000467663 SLC25A24Q6NUK1 477 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 C10orf99Q6UWK7 81 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 ZNF680Q8NEM1 530 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 SCARB1Q8WTV0 552 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 PSMG3Q9BT73 122 aaPredicted RBP9.42□□□□□ -0.9
CTNS-205ENST00000467663 UBQLN2Q9UHD9 624 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 TIMM9Q9Y5J7 89 aa9.42□□□□□ -0.9
CTNS-205ENST00000467663 A0A1W2PRX2 142 aa9.41□□□□□ -0.9
CTNS-205ENST00000467663 C17orf112F2Z3M2 114 aa9.41□□□□□ -0.9
CTNS-205ENST00000467663 AP4M1O00189 453 aa9.41□□□□□ -0.9
CTNS-205ENST00000467663 DEFA4P12838 97 aa9.41□□□□□ -0.9
CTNS-205ENST00000467663 SERF2P84101 59 aa9.41□□□□□ -0.9
CTNS-205ENST00000467663 CLINT1Q14677 625 aa9.41□□□□□ -0.9
CTNS-205ENST00000467663 OXLD1Q5BKU9 147 aa9.41□□□□□ -0.9
CTNS-205ENST00000467663 TMEM144Q7Z5S9 345 aa9.41□□□□□ -0.9
CTNS-205ENST00000467663 HAPLN4Q86UW8 402 aa9.41□□□□□ -0.9
CTNS-205ENST00000467663 SLC35E1Q96K37 410 aa9.41□□□□□ -0.9
CTNS-205ENST00000467663 SMIM3Q9BZL3 60 aa9.41□□□□□ -0.9
CTNS-205ENST00000467663 WDR61Q9GZS3 305 aaKnown RBP9.41□□□□□ -0.9
CTNS-205ENST00000467663 WDR83OSQ9Y284 106 aa9.41□□□□□ -0.9
CTNS-205ENST00000467663 PSMB11A5LHX3 300 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 UMAD1C9J7I0 102 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 SCGB2A1O75556 95 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 SPP1P10451 314 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 AREGP15514 252 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 IFITM2Q01629 132 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 ARL16Q0P5N6 197 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 UNQ5815/PRO19632Q6UWF5 114 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 REC114Q7Z4M0 266 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 SLC35E3Q7Z769 313 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 ZNF709Q8N972 641 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 TMEM170AQ8WVE7 144 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 RBMXL1Q96E39 390 aaKnown RBP9.4□□□□□ -0.9
CTNS-205ENST00000467663 ATP6V0BQ99437 205 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 SLC25A32Q9H2D1 315 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 WFDC1Q9HC57 220 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 FBXO7Q9Y3I1 522 aa9.4□□□□□ -0.9
CTNS-205ENST00000467663 TGP01266 2768 aa9.4□□□□□ -0.91
CTNS-205ENST00000467663 ATP6V0E1O15342 81 aa9.39□□□□□ -0.91
CTNS-205ENST00000467663 MBP02144 154 aa9.39□□□□□ -0.91
CTNS-205ENST00000467663 PF4V1P10720 104 aa9.39□□□□□ -0.91
CTNS-205ENST00000467663 EGR2P11161 476 aaPredicted RBP9.39□□□□□ -0.91
CTNS-205ENST00000467663 OPRK1P41145 380 aa9.39□□□□□ -0.91
CTNS-205ENST00000467663 RAB14P61106 215 aa9.39□□□□□ -0.91
CTNS-205ENST00000467663 FAM209BQ5JX69 171 aa9.39□□□□□ -0.91
CTNS-205ENST00000467663 TEPPQ6URK8 271 aa9.39□□□□□ -0.91
CTNS-205ENST00000467663 TMEM116Q8NCL8 245 aa9.39□□□□□ -0.91
CTNS-205ENST00000467663 LFNGQ8NES3 379 aa9.39□□□□□ -0.91
CTNS-205ENST00000467663 RNF141Q8WVD5 230 aa9.39□□□□□ -0.91
CTNS-205ENST00000467663 NOL4LQ96MY1 436 aaPredicted RBP9.39□□□□□ -0.91
CTNS-205ENST00000467663 HSPB9Q9BQS6 159 aa9.39□□□□□ -0.91
CTNS-205ENST00000467663 PARP11Q9NR21 331 aa9.39□□□□□ -0.91
CTNS-205ENST00000467663 GAR1Q9NY12 217 aaKnown RBP9.39□□□□□ -0.91
CTNS-205ENST00000467663 NOTCH3Q9UM47 2321 aa9.38□□□□□ -0.91
CTNS-205ENST00000467663 TRAV30A0A087WSZ9 112 aa9.38□□□□□ -0.91
CTNS-205ENST00000467663 TRAV41A0A0B4J266 112 aa9.38□□□□□ -0.91
CTNS-205ENST00000467663 LINC01548A6NM66 108 aa9.38□□□□□ -0.91
CTNS-205ENST00000467663 CD33P20138 364 aa9.38□□□□□ -0.91
CTNS-205ENST00000467663 NDPQ00604 133 aa9.38□□□□□ -0.91
CTNS-205ENST00000467663 DPPA3Q6W0C5 159 aa9.38□□□□□ -0.91
CTNS-205ENST00000467663 SLC16A13Q7RTY0 426 aa9.38□□□□□ -0.91
CTNS-205ENST00000467663 ZNF329Q86UD4 541 aa9.38□□□□□ -0.91
CTNS-205ENST00000467663 COMMD1Q8N668 190 aa9.38□□□□□ -0.91
CTNS-205ENST00000467663 OR2G3Q8NGZ4 309 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms