RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 CCDC167Q9P0B6 97 aa4.42□□□□□ -1.7
LRCH3-212ENST00000466845 PTPRSQ13332 1948 aa4.42□□□□□ -1.7
LRCH3-212ENST00000466845 TMEM131Q92545 1883 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 WI2-2373I1.2A0A1W2PRP0 233 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 C15orf62A8K5M9 175 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 SNURFLB1AK76 121 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 ISLRO14498 428 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 UBL3O95164 117 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 CD52P31358 61 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 DRD3P35462 400 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 SRP14P37108 136 aaKnown RBP4.41□□□□□ -1.7
LRCH3-212ENST00000466845 RPS10P46783 165 aaKnown RBP4.41□□□□□ -1.7
LRCH3-212ENST00000466845 SLC25A1P53007 311 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 CACNG7P62955 275 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 PAX8Q06710 450 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 Q0VG73 95 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 XAF1Q6GPH4 301 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 TRNP1Q6NT89 227 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 MRPL54Q6P161 138 aaKnown RBP4.41□□□□□ -1.7
LRCH3-212ENST00000466845 SSX8Q7RTT4 187 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 RPS19BP1Q86WX3 136 aaKnown RBP4.41□□□□□ -1.7
LRCH3-212ENST00000466845 PRR15Q8IV56 129 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 C9orf40Q8IXQ3 194 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 OR4K13Q8NH42 304 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 NEUROG1Q92886 237 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 NEURL3Q96EH8 262 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 BORCS8Q96FH0 119 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 METTL26Q96S19 204 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 PEBP4Q96S96 227 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 PRSS27Q9BQR3 290 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 MRPL20Q9BYC9 149 aaKnown RBP4.41□□□□□ -1.7
LRCH3-212ENST00000466845 DUSP21Q9H596 190 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 HEBP2Q9Y5Z4 205 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 COL4A6Q14031 1691 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 RALGAPA2Q2PPJ7 1873 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 NLRC5Q86WI3 1866 aa4.41□□□□□ -1.7
LRCH3-212ENST00000466845 PRRC2BQ5JSZ5 2229 aaKnown RBP4.4□□□□□ -1.7
LRCH3-212ENST00000466845 IGKV1D-8A0A087WSZ0 117 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 TMEM262E9PQX1 116 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 TNFSF12O43508 249 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 GSTZ1O43708 216 aaPredicted RBP4.4□□□□□ -1.71
LRCH3-212ENST00000466845 SLC37A4O43826 429 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 YPEL1O60688 119 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 SFT2D2O95562 160 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 PRSS2P07478 247 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 LINC00032P0C843 101 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 IGLC2P0DOY2 106 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 IGLC3P0DOY3 106 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 IGHV4-31P0DP07 118 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 CRYGSP22914 178 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 HINT1P49773 126 aaPredicted RBP4.4□□□□□ -1.71
LRCH3-212ENST00000466845 DSCR9P59020 149 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 SEC61BP60468 96 aaKnown RBP4.4□□□□□ -1.71
LRCH3-212ENST00000466845 TMEM258P61165 79 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 HERV-K104P61576 105 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 SEC61A1P61619 476 aaKnown RBP4.4□□□□□ -1.71
LRCH3-212ENST00000466845 RPS18P62269 152 aaKnown RBP4.4□□□□□ -1.71
LRCH3-212ENST00000466845 RPS11P62280 158 aaKnown RBP eCLIP4.4□□□□□ -1.71
LRCH3-212ENST00000466845 ODF3L2Q3SX64 289 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 CENPWQ5EE01 88 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 TMEM236Q5W0B7 351 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 UNQ9165/PRO28630Q6UXU0 137 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 SHISA6Q6ZSJ9 500 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 SGMS2Q8NHU3 365 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 CCL17Q92583 94 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 YPEL2Q96QA6 119 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 GPX7Q96SL4 187 aaPredicted RBP4.4□□□□□ -1.71
LRCH3-212ENST00000466845 RTL8AQ9BWD3 113 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 PCTPQ9UKL6 214 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 NOP16Q9Y3C1 178 aaKnown RBP4.4□□□□□ -1.71
LRCH3-212ENST00000466845 COL6A3P12111 3177 aa4.4□□□□□ -1.71
LRCH3-212ENST00000466845 DOCK6Q96HP0 2047 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 TTC28Q96AY4 2481 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 LAMA2P24043 3122 aaKnown RBP4.39□□□□□ -1.71
LRCH3-212ENST00000466845 TCHHQ07283 1943 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 CHD9Q3L8U1 2897 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 IGKV6D-21A0A0A0MT36 114 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 IGLV1-36A0A0B4J1U3 117 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 TRAV8-6A0A0B4J262 113 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 LOC100131303A0A0U1RQF7 123 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 C7orf77A4D0Y5 90 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 ARRDC5A6NEK1 342 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 HMSDA8MTL9 139 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 EPM2AB3EWF7 344 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 H3BP45 60 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 PIRO00625 290 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 GEMIN2O14893 280 aaKnown RBP4.39□□□□□ -1.71
LRCH3-212ENST00000466845 TIMM23O14925 209 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 LYZL6O75951 148 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 IGHG1P01857 330 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 TRGC1P0CF51 173 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 RBMY1CP0DJD4 496 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 PPIBP23284 216 aaKnown RBP4.39□□□□□ -1.71
LRCH3-212ENST00000466845 BTCP35070 178 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 GABARAPL2P60520 117 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 PPP1CAP62136 330 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 SRSF9Q13242 221 aaKnown RBP eCLIP4.39□□□□□ -1.71
LRCH3-212ENST00000466845 RTL8BQ17RB0 113 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 RRN3P1Q2M238 152 aa4.39□□□□□ -1.71
LRCH3-212ENST00000466845 NSUN5P1Q3KNT7 163 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms