RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 HOXA3O43365 443 aaPredicted RBP7.27□□□□□ -1.25
HPS4-209ENST00000466781 OR9G9P0C7N8 305 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 CD24P25063 80 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 NBL1P41271 181 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 LHX2P50458 406 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 LINC00158P58513 81 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 EFNB1P98172 346 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 SRSF1Q07955 248 aaKnown RBP eCLIP7.27□□□□□ -1.25
HPS4-209ENST00000466781 C3orf56Q8N813 242 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 SLC17A3O00476 420 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 RPL35AP18077 110 aaKnown RBP7.26□□□□□ -1.25
HPS4-209ENST00000466781 A0A1B0GWB2 263 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 F8WEM9 126 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 LYNX1G3V0Z9 82 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 PIN1P1O15428 100 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 YPEL1O60688 119 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 LYNX1P0DP58 116 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 GNG5P63218 68 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 MBD3L1Q8WWY6 194 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 RCHY1Q96PM5 261 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 YPEL2Q96QA6 119 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 MESP1Q9BRJ9 268 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 PLXNA3P51805 1871 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 LDLRAD4O15165 306 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 PUSL1Q8N0Z8 303 aaKnown RBP7.26□□□□□ -1.25
HPS4-209ENST00000466781 CYSLTR1Q9Y271 337 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 SIGLEC5O15389 551 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 GFI1BQ5VTD9 330 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 SLC25A2Q9BXI2 301 aa7.26□□□□□ -1.25
HPS4-209ENST00000466781 IGHV1-18A0A0C4DH31 117 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 PQLC2LA1A4F0 135 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 LINC01590Q5TEZ4 76 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 CHTOPQ9Y3Y2 248 aaKnown RBP7.25□□□□□ -1.25
HPS4-209ENST00000466781 TRAV2A0A0B4J234 112 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 C15orf61A6NNL5 157 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 TIMM23O14925 209 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 GATA2P23769 480 aaPredicted RBP7.25□□□□□ -1.25
HPS4-209ENST00000466781 ATP5G3P48201 142 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 RCC1LQ96I51 464 aaKnown RBP7.25□□□□□ -1.25
HPS4-209ENST00000466781 EFNA4P52798 201 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 SNAI2O43623 268 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 SPOCK3Q9BQ16 436 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 SPRR3Q9UBC9 169 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 GGTLC3B5MD39 225 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 NMBP08949 121 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 C1QL2Q7Z5L3 287 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 ST6GALNAC3Q8NDV1 305 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 FLVCR1-AS1Q8TAF5 88 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 RNF114Q9Y508 228 aa7.25□□□□□ -1.25
HPS4-209ENST00000466781 NAPSAO96009 420 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 PLPPR1Q8TBJ4 325 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 GREB1Q4ZG55 1949 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 CD5P06127 495 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 ORMDL2Q53FV1 153 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 JPT2Q9H910 190 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 TRAV9-1A0A075B6T8 112 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 HIGD1CA8MV81 97 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 TYMSP04818 313 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 C1QTNF9P0C862 333 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 CEACAM8P31997 349 aaPredicted RBP7.24□□□□□ -1.25
HPS4-209ENST00000466781 RNF166Q96A37 237 aaPredicted RBP7.24□□□□□ -1.25
HPS4-209ENST00000466781 HBDP02042 147 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 MORN2Q502X0 79 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 MORN3Q6PF18 240 aaPredicted RBP7.24□□□□□ -1.25
HPS4-209ENST00000466781 TNFRSF14Q92956 283 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 B4DSR2 109 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 ERVH48-1M5A8F1 160 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 DDTP30046 118 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 ST6GALNAC6Q969X2 333 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 IMMP2LQ96T52 175 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 CRIM1Q9NZV1 1036 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 LINC00527Q9UJ94 153 aa7.24□□□□□ -1.25
HPS4-209ENST00000466781 PLXNA4Q9HCM2 1894 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 NAT1P18440 290 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 SRSF6Q13247 344 aaKnown RBP7.23□□□□□ -1.25
HPS4-209ENST00000466781 PCNTO95613 3336 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 IGKV1D-43A0A0B4J1Z2 117 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 TRAV8-2A0A0B4J237 113 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 PGPEP1LA6NFU8 196 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 TOMM40O96008 361 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 EVI2AP22794 236 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 UCP1P25874 307 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 PLNP26678 52 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 ZNF672Q499Z4 452 aaPredicted RBP7.23□□□□□ -1.25
HPS4-209ENST00000466781 TMEM144Q7Z5S9 345 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 TMEM219Q86XT9 240 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 PINLYPA6NC86 204 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 DPM2O94777 84 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 H2BFSP57053 126 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 COQ2Q96H96 371 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 PSG8Q9UQ74 426 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 TRGV1A0A0A0MS02 117 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 IGHV1-46P01743 117 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 LINC00614P0C842 121 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 CD200R1LQ6Q8B3 271 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 ZNF497Q6ZNH5 498 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 GATD1Q8NB37 220 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 KLHL30-AS1Q8NEE0 82 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 IGHV3-73A0A0B4J1V6 119 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 TRAV8-4A0A0B4J246 113 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms