RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 RBM7Q9Y580 266 aaKnown RBP1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 VIRMAQ69YN4 1812 aaKnown RBP1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 NUP210LQ5VU65 1888 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 SCN9AQ15858 1988 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 CD109Q6YHK3 1445 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 KIF13BQ9NQT8 1826 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 TRAV7A0A075B6U4 112 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 hCG_1818297A0A087WSY0 165 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 A0A087WX48 190 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 TMEM269A0A1B0GVZ9 245 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 RFPL4AA6NLU0 287 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 A8MT66 165 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 RFPL4AL1F8VTS6 287 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 HMGB3O15347 200 aaKnown RBP1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 C8GP07360 202 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 MSMBP08118 114 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 SRP19P09132 144 aaKnown RBP1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 ERP29P30040 261 aaKnown RBP1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 CSN1S1P47710 185 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 NCALDP61601 193 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 STX19Q8N4C7 294 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 PLEKHB2Q96CS7 222 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 LYSMD1Q96S90 227 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 IMMP2LQ96T52 175 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 DOHHQ9BU89 302 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 C6orf62Q9GZU0 229 aaPredicted RBP1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 CHST6Q9GZX3 395 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 RNF122Q9H9V4 155 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 OR52A1Q9UKL2 312 aa1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 AMMECR1Q9Y4X0 333 aaPredicted RBP1.69□□□□□ -2.14
CDC42BPA-211ENST00000466538 MPDZO75970 2070 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 TRBV19A0A075B6N1 114 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 MAP1LC3B2A6NCE7 125 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 TSTD3H0UI37 97 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 OR2J2O76002 312 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 C1QAP02745 245 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 CCL5P13501 91 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 SRIP30626 198 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 PHBP35232 272 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 CCR2P41597 374 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 ZNF80P51504 273 aaPredicted RBP1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 DEFA3P59666 94 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 PSPHP78330 225 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 GRK1Q15835 563 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 LTC4SQ16873 150 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 ZNF791Q3KP31 576 aaPredicted RBP1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 TMEM128Q5BJH2 165 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 KTN1-AS1Q86SY8 53 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 SPACA4Q8TDM5 124 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 SERPINI1Q99574 410 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 MAP1LC3BQ9GZQ8 125 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 JPT1Q9UK76 154 aa1.68□□□□□ -2.14
CDC42BPA-211ENST00000466538 MYH10P35580 1976 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 TRBV20OR9-2A0A075B6H5 130 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 MEIKINA0A087WXM9 373 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 IGHV1-18A0A0C4DH31 117 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 A0A1B0GVG6 124 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 DPRXA6NFQ7 191 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 ZNF705FA8MVS1 300 aaPredicted RBP1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 G3V2T6 193 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 BUB1B-PAK6H3BSN5 160 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 H7C2G1 150 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 PIRO00625 290 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 LEPROTO15243 131 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 CRYZL1O95825 349 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 RBP1P09455 135 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 GPX2P18283 190 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 RPS4Y1P22090 263 aaKnown RBP1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 S100A7P31151 101 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 RPL28P46779 137 aaKnown RBP1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 AKR1C8PQ5T2L2 129 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 DCUN1D2Q6PH85 259 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 Q6Q795 121 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 ZNF705AQ6ZN79 300 aaPredicted RBP1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 ZNF439Q8NDP4 499 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 SLC25A40Q8TBP6 338 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 DYDC1Q8WWB3 177 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 TOMM6Q96B49 74 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 CARD19Q96LW7 228 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 EFCAB1Q9HAE3 211 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 FUT9Q9Y231 359 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 PTPRSQ13332 1948 aa1.67□□□□□ -2.14
CDC42BPA-211ENST00000466538 COL11A1P12107 1806 aaPredicted RBP1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 TRAV38-1A0A0B4J264 116 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 A0A0D9SEW6 157 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 ZNF860A6NHJ4 632 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 CLDN25C9JDP6 229 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 H7C1C5 153 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 I3L521 148 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 NAPSAO96009 420 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 ZNF705DP0CH99 300 aaPredicted RBP1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 PPIBP23284 216 aaKnown RBP1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 RPS3P23396 243 aaKnown RBP eCLIP1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 LCN6P62502 163 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 HBA1P69905 142 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 CCL20P78556 96 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 DHFR2Q86XF0 187 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 C10orf126Q8N4M7 172 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms