RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 TMEM133Q9H2Q1 129 aa7.21□□□□□ -1.26
SYNE1-217ENST00000466159 NBASA2RRP1 2371 aa7.21□□□□□ -1.26
SYNE1-217ENST00000466159 A0A1B0GUS0 222 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 FAM90A27PA6NNH2 459 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 B9A039 149 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 RNF224P0DH78 156 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 APELAP0DMC3 54 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 CNTFRP26992 372 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 PPOXP50336 477 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 TAS2R45P59539 299 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 DEFA6Q01524 100 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 VMA21Q3ZAQ7 101 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 FAM167A-AS1Q96KT0 104 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 C19orf24Q9BVV8 132 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 SLC25A2Q9BXI2 301 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 DNAJC4Q9NNZ3 241 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 IGKV1D-37A0A075B6S9 117 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 SIAH2O43255 324 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 MC5RP33032 325 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 GNG4P50150 75 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 ERVFC1-1P60608 527 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 HCP5Q6MZN7 132 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 C19orf35Q6ZS72 473 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 RNASEH2CQ8TDP1 164 aaKnown RBP7.2□□□□□ -1.26
SYNE1-217ENST00000466159 IL36BQ9NZH7 164 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 RALYQ9UKM9 306 aaKnown RBP7.2□□□□□ -1.26
SYNE1-217ENST00000466159 LY96Q9Y6Y9 160 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 ARL2-SNX15V9GYD0 113 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 ABCA1O95477 2261 aa7.2□□□□□ -1.26
SYNE1-217ENST00000466159 IGHV2-26A0A0B4J1V2 119 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 SNRPCP09234 159 aaKnown RBP7.19□□□□□ -1.26
SYNE1-217ENST00000466159 FRMD6-AS1P0C7T7 363 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 PYYP10082 97 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 GZMBP10144 247 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 SUB1P53999 127 aaKnown RBP eCLIP7.19□□□□□ -1.26
SYNE1-217ENST00000466159 LGALS4P56470 323 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 PATE2Q6UY27 113 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 OR5AU1Q8NGC0 362 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 BTF3L4Q96K17 158 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 CHODLQ9H9P2 273 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 V9GYV3 84 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 COX7A2P2O60397 106 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 BTF3P20290 206 aaKnown RBP7.19□□□□□ -1.26
SYNE1-217ENST00000466159 CBLN1P23435 193 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 ADMP35318 185 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 UBE2L3P68036 154 aaKnown RBP7.19□□□□□ -1.26
SYNE1-217ENST00000466159 JOSD1Q15040 202 aaPredicted RBP7.19□□□□□ -1.26
SYNE1-217ENST00000466159 ZNF841Q6ZN19 808 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 TMEM256Q8N2U0 113 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 MUC15Q8N387 334 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 C14orf144Q96I85 54 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 MRPL32Q9BYC8 188 aaKnown RBP7.19□□□□□ -1.26
SYNE1-217ENST00000466159 RNASE7Q9H1E1 156 aaKnown RBP7.19□□□□□ -1.26
SYNE1-217ENST00000466159 PRO1933Q9H354 126 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 ZNF355PQ9NSJ1 428 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 ARHGAP32A7KAX9 2087 aa7.19□□□□□ -1.26
SYNE1-217ENST00000466159 ANKHD1Q8IWZ3 2542 aaKnown RBP7.19□□□□□ -1.26
SYNE1-217ENST00000466159 A0A1B0GV90 55 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 A0A1W2PRE2 83 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 TCRBV4S1A1TA0A5B7 111 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 IGLC7A0M8Q6 106 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 NUPR1O60356 82 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 IGLV1-47P01700 117 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 IGF2RP11717 2491 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 LGALS7P47929 136 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 MFAP2P55001 183 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 YPEL3P61236 119 aaPredicted RBP7.18□□□□□ -1.26
SYNE1-217ENST00000466159 C10orf113Q5VZT2 155 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 LHFPL4Q7Z7J7 247 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 MMD2Q8IY49 270 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 LINC00479Q96M42 142 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 IGHV3-21A0A0B4J1V1 117 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 GRIFINA4D1Z8 144 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 COX7A1P24310 79 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 FXYD3Q14802 87 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 CDSNQ15517 529 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 TNXAQ16473 311 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 ASPHD1Q5U4P2 390 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 GBGT1Q8N5D6 347 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 MISP3Q96FF7 219 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 CSMD1Q96PZ7 3565 aa7.18□□□□□ -1.26
SYNE1-217ENST00000466159 C22orf46C9J442 243 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 BUB1B-PAK6H3BSN5 160 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 SPINK4O60575 86 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 LY6HO94772 140 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 MOSP00540 346 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 IGLV2-8P01709 118 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 ZNF124Q15973 351 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 RPEL1Q2QD12 228 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 TIGITQ495A1 244 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 DNLZQ5SXM8 178 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 OR8I2Q8N0Y5 310 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 THAP8Q8NA92 274 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 NHLRC2Q8NBF2 726 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 OR5R1Q8NH85 324 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 TMEM18Q96B42 140 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 INSIG2Q9Y5U4 225 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 IGHV1-3A0A0C4DH29 117 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 CCL21O00585 134 aa7.17□□□□□ -1.26
SYNE1-217ENST00000466159 FSTL3O95633 263 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms