RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 hADV38S2A0JD32 116 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 A8MT66 165 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 C1orf196B1AJZ1 125 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 BUB1B-PAK6H3BSN5 160 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 FADS1O60427 444 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 RBP1P09455 135 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 ASAH2BP0C7U1 165 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 SMIM10L2AP0DMW4 78 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 SMIM10L2BP0DMW5 78 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 CASP1P29466 404 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 BRS3P32247 399 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 RHOBP62745 196 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 RANP62826 216 aaKnown RBP0.71□□□□□ -2.3
SSB-207ENST00000465871 SRSF6Q13247 344 aaKnown RBP0.71□□□□□ -2.3
SSB-207ENST00000465871 EDDM3AQ14507 147 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 RHEBQ15382 184 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 UNQ6190/PRO20217Q6UXQ8 127 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 Q6ZQT0 140 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 TRAPPC6BQ86SZ2 158 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 SIGLECL1Q8N7X8 197 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 ZNF565Q8N9K5 539 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 OR4D11Q8NGI4 311 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 CT55Q8WUE5 264 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 AQP3Q92482 292 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 ITFG2Q969R8 447 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 KIFC1Q9BW19 673 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 CYSTM1Q9H1C7 97 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 RNASE7Q9H1E1 156 aaKnown RBP0.71□□□□□ -2.3
SSB-207ENST00000465871 TRABDQ9H4I3 376 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 OSTCQ9NRP0 149 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 MED9Q9NWA0 146 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 CYSLTR1Q9Y271 337 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 MICAL3Q7RTP6 2002 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 NUP155O75694 1391 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 MAST2Q6P0Q8 1798 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 PLB1Q6P1J6 1458 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 TRAV1-1A0A0B4J248 108 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 PDE6DO43924 150 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 E2F6O75461 281 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 TCL1BO95988 128 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 CLPSP04118 112 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 S100A6P06703 90 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 CTSDP07339 412 aaPredicted RBP0.7□□□□□ -2.3
SSB-207ENST00000465871 MGST1P10620 155 aaKnown RBP0.7□□□□□ -2.3
SSB-207ENST00000465871 G6PCP35575 357 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 AP3S2P59780 193 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 CDC42P60953 191 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 RNASE10Q5GAN6 216 aaKnown RBP0.7□□□□□ -2.3
SSB-207ENST00000465871 SPANXN5Q5MJ07 72 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 C10orf55Q5SWW7 151 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 PHF13Q86YI8 300 aaPredicted RBP0.7□□□□□ -2.3
SSB-207ENST00000465871 OR6V1Q8N148 313 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 Q8N2B8 174 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 C12orf29Q8N999 325 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 GDPD1Q8N9F7 314 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 SLC25A40Q8TBP6 338 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 DGCR14Q96DF8 476 aaKnown RBP0.7□□□□□ -2.3
SSB-207ENST00000465871 BTF3L4Q96K17 158 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 SIGMAR1Q99720 223 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 UCK1Q9HA47 277 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 FBXO5Q9UKT4 447 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 SLC22A13Q9Y226 551 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 KIF13BQ9NQT8 1826 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 ZFYVE9O95405 1425 aa0.7□□□□□ -2.3
SSB-207ENST00000465871 HEATR5BQ9P2D3 2071 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 DOCK5Q9H7D0 1870 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 IGKV2D-26A0A0A0MRZ7 120 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 TRAV3A0A0B4J244 114 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 CLDN25C9JDP6 229 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 SULT1B1O43704 296 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 OR2J2O76002 312 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 C8GP07360 202 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 PPIBP23284 216 aaKnown RBP0.69□□□□□ -2.3
SSB-207ENST00000465871 HIST1H3AP68431 136 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 H3F3AP84243 136 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 REEP5Q00765 189 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 IAH1Q2TAA2 248 aaPredicted RBP0.69□□□□□ -2.3
SSB-207ENST00000465871 TMEM97Q5BJF2 176 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 ZNF826PQ6ZT77 177 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 DEFB128Q7Z7B8 93 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 LINC00311Q8N616 119 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 OR51A2Q8NGJ7 313 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 OR8D4Q8NGM9 314 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 GPR146Q96CH1 333 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 C20orf27Q9GZN8 174 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 ACER3Q9NUN7 267 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 SLC35A3Q9Y2D2 325 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 UTP11Q9Y3A2 253 aaKnown RBP0.69□□□□□ -2.3
SSB-207ENST00000465871 FAM32AQ9Y421 112 aaKnown RBP0.69□□□□□ -2.3
SSB-207ENST00000465871 GLI3P10071 1580 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 ROBO3Q96MS0 1386 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 ALPK2Q86TB3 2170 aa0.69□□□□□ -2.3
SSB-207ENST00000465871 A0A087X0T9 212 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 CYB5BO43169 146 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 OR2B3O76000 313 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 UBL3O95164 117 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 ZNF682O95780 498 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 SERPINE1P05121 402 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 COX6A1P12074 109 aa0.68□□□□□ -2.3
SSB-207ENST00000465871 ZNF93P35789 620 aaPredicted RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms