RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 IGHV1-3A0A0C4DH29 117 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 CGB1A6NKQ9 187 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 RNF223E7ERA6 249 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 INS-IGF2F8WCM5 200 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 GNB1P62873 340 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 CST9LP1Q5W188 147 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 C16orf82Q7Z2V1 217 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 TMEM144Q7Z5S9 345 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 LHFPL4Q7Z7J7 247 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 KRTAP1-3Q8IUG1 177 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 MAPK1IP1LQ8NDC0 245 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 VSTM2AQ8TAG5 236 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 SEPSECSQ9HD40 501 aaKnown RBP11.63□□□□□ -0.55
COL5A1-205ENST00000464187 SLC45A2Q9UMX9 530 aa11.63□□□□□ -0.55
COL5A1-205ENST00000464187 UNC79Q9P2D8 2635 aa11.62□□□□□ -0.55
COL5A1-205ENST00000464187 PLXNB1O43157 2135 aa11.62□□□□□ -0.55
COL5A1-205ENST00000464187 IGHV3-72A0A0B4J1Y9 119 aa11.62□□□□□ -0.55
COL5A1-205ENST00000464187 PDE6DO43924 150 aa11.62□□□□□ -0.55
COL5A1-205ENST00000464187 RHOBP62745 196 aa11.62□□□□□ -0.55
COL5A1-205ENST00000464187 LOXL1Q08397 574 aaPredicted RBP11.62□□□□□ -0.55
COL5A1-205ENST00000464187 GAMTQ14353 236 aa11.62□□□□□ -0.55
COL5A1-205ENST00000464187 C10orf55Q5SWW7 151 aa11.62□□□□□ -0.55
COL5A1-205ENST00000464187 TPTE2P1Q5T6R2 138 aa11.62□□□□□ -0.55
COL5A1-205ENST00000464187 OR51G1Q8NGK1 321 aa11.62□□□□□ -0.55
COL5A1-205ENST00000464187 RITA1Q96K30 269 aa11.62□□□□□ -0.55
COL5A1-205ENST00000464187 Q96MF0 132 aa11.62□□□□□ -0.55
COL5A1-205ENST00000464187 ZNF430Q9H8G1 570 aaPredicted RBP11.62□□□□□ -0.55
COL5A1-205ENST00000464187 METTL1Q9UBP6 276 aaKnown RBP11.62□□□□□ -0.55
COL5A1-205ENST00000464187 MC5RP33032 325 aa11.61□□□□□ -0.55
COL5A1-205ENST00000464187 CEACAM3P40198 252 aa11.61□□□□□ -0.55
COL5A1-205ENST00000464187 UBE2E1P51965 193 aa11.61□□□□□ -0.55
COL5A1-205ENST00000464187 CD69Q07108 199 aa11.61□□□□□ -0.55
COL5A1-205ENST00000464187 MLANAQ16655 118 aa11.61□□□□□ -0.55
COL5A1-205ENST00000464187 TPSG1Q9NRR2 321 aa11.61□□□□□ -0.55
COL5A1-205ENST00000464187 HIF1ANQ9NWT6 349 aa11.61□□□□□ -0.55
COL5A1-205ENST00000464187 HILPDAQ9Y5L2 63 aa11.61□□□□□ -0.55
COL5A1-205ENST00000464187 A0A1W2PN81 502 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 F6UZH7 168 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 SLC25A17O43808 307 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 GCHFRP30047 84 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 CHRNA7P36544 502 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 LGALS4P56470 323 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 ERHP84090 104 aaKnown RBP11.6□□□□□ -0.55
COL5A1-205ENST00000464187 KIAA0141Q14154 515 aaPredicted RBP11.6□□□□□ -0.55
COL5A1-205ENST00000464187 MRGPRG-AS1Q2M3A8 158 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 FAM210BQ96KR6 192 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 YTHDF2Q9Y5A9 579 aaKnown RBP11.6□□□□□ -0.55
COL5A1-205ENST00000464187 HECTD1Q9ULT8 2610 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 A0A1W2PPI3 338 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 AP4M1O00189 453 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 OR10J1P30954 320 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 WT1-ASQ06250 92 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 FABP9Q0Z7S8 132 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 VMA21Q3ZAQ7 101 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 MINOS1Q5TGZ0 78 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 SLC16A13Q7RTY0 426 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 LINC01356Q8N9X3 169 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 MINOS1-NBL1R4GNA1 71 aa11.6□□□□□ -0.55
COL5A1-205ENST00000464187 TRBV24-1A0A075B6N3 115 aa11.59□□□□□ -0.55
COL5A1-205ENST00000464187 TRAV20A0A0B4J274 112 aa11.59□□□□□ -0.55
COL5A1-205ENST00000464187 CENPVL3A0A0U1RRI6 287 aa11.59□□□□□ -0.55
COL5A1-205ENST00000464187 VENTXO95231 258 aa11.59□□□□□ -0.55
COL5A1-205ENST00000464187 SSX2Q16385 188 aa11.59□□□□□ -0.55
COL5A1-205ENST00000464187 MIR17HGQ75NE6 70 aa11.59□□□□□ -0.55
COL5A1-205ENST00000464187 SLC35E1Q96K37 410 aa11.59□□□□□ -0.55
COL5A1-205ENST00000464187 TXNDC17Q9BRA2 123 aa11.59□□□□□ -0.55
COL5A1-205ENST00000464187 DERL1Q9BUN8 251 aa11.59□□□□□ -0.55
COL5A1-205ENST00000464187 C7orf69Q9H7B7 122 aa11.59□□□□□ -0.55
COL5A1-205ENST00000464187 ZNF98A6NK75 572 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 TIMM23O14925 209 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 ACTL6BO94805 426 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 NDUFB4O95168 129 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 GATA2P23769 480 aaPredicted RBP11.58□□□□□ -0.56
COL5A1-205ENST00000464187 FAM78BQ5VT40 261 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 NANPQ8TBE9 248 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 TBL2Q9Y4P3 447 aaKnown RBP11.58□□□□□ -0.56
COL5A1-205ENST00000464187 CELSR1Q9NYQ6 3014 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 SCO2A0A1W2PP80 73 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 H7BYZ3 331 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 PFN1P07737 140 aaKnown RBP11.58□□□□□ -0.56
COL5A1-205ENST00000464187 GATA3P23771 443 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 SAA4P35542 130 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 GPX4P36969 197 aaPredicted RBP11.58□□□□□ -0.56
COL5A1-205ENST00000464187 LGALS7P47929 136 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 DYNAPQ8N1N2 210 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 WFDC11Q8NEX6 87 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 OR2T6Q8NHC8 308 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 CACNG8Q8WXS5 425 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 C12orf57Q99622 126 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 DOK5Q9P104 306 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 FUT9Q9Y231 359 aa11.58□□□□□ -0.56
COL5A1-205ENST00000464187 ITPR2Q14571 2701 aa11.57□□□□□ -0.56
COL5A1-205ENST00000464187 ZNF469Q96JG9 3925 aaPredicted RBP11.57□□□□□ -0.56
COL5A1-205ENST00000464187 TRAV40A0A0B4J280 105 aa11.57□□□□□ -0.56
COL5A1-205ENST00000464187 CLN5O75503 358 aa11.57□□□□□ -0.56
COL5A1-205ENST00000464187 TRGC2P03986 189 aa11.57□□□□□ -0.56
COL5A1-205ENST00000464187 CNTFRP26992 372 aa11.57□□□□□ -0.56
COL5A1-205ENST00000464187 SSBP2P81877 361 aaPredicted RBP11.57□□□□□ -0.56
COL5A1-205ENST00000464187 CCDC144NLQ6NUI1 221 aa11.57□□□□□ -0.56
COL5A1-205ENST00000464187 LINC01551Q86U37 167 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms