RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 MRGPRFQ96AM1 343 aa12.47□□□□□ -0.41
HMGN1-210ENST00000464078 DYNC1H1Q14204 4646 aaKnown RBP12.47□□□□□ -0.41
HMGN1-210ENST00000464078 CORTO00230 105 aa12.46□□□□□ -0.41
HMGN1-210ENST00000464078 RTL8CO15255 209 aa12.46□□□□□ -0.41
HMGN1-210ENST00000464078 P2RY1P47900 373 aa12.46□□□□□ -0.41
HMGN1-210ENST00000464078 TAS2R20P59543 309 aa12.46□□□□□ -0.41
HMGN1-210ENST00000464078 LYSMD2Q8IV50 215 aa12.46□□□□□ -0.41
HMGN1-210ENST00000464078 METTL26Q96S19 204 aa12.46□□□□□ -0.41
HMGN1-210ENST00000464078 YTHDF1Q9BYJ9 559 aaKnown RBP12.46□□□□□ -0.41
HMGN1-210ENST00000464078 CELA1Q9UNI1 258 aa12.46□□□□□ -0.41
HMGN1-210ENST00000464078 PRSS29PA6NIE9 313 aa12.45□□□□□ -0.42
HMGN1-210ENST00000464078 ZNF688P0C7X2 276 aa12.45□□□□□ -0.42
HMGN1-210ENST00000464078 PRSS3P35030 304 aa12.45□□□□□ -0.42
HMGN1-210ENST00000464078 SNCAP37840 140 aa12.45□□□□□ -0.42
HMGN1-210ENST00000464078 UCP3P55916 312 aa12.45□□□□□ -0.42
HMGN1-210ENST00000464078 DEFB131BA0A096LNP1 70 aa12.44□□□□□ -0.42
HMGN1-210ENST00000464078 KNCNA6PVL3 124 aa12.44□□□□□ -0.42
HMGN1-210ENST00000464078 CLN5O75503 358 aa12.44□□□□□ -0.42
HMGN1-210ENST00000464078 P0C879 139 aa12.44□□□□□ -0.42
HMGN1-210ENST00000464078 C12orf74Q32Q52 190 aa12.44□□□□□ -0.42
HMGN1-210ENST00000464078 SAMD12Q8N8I0 201 aa12.44□□□□□ -0.42
HMGN1-210ENST00000464078 NDUFAF3Q9BU61 184 aa12.44□□□□□ -0.42
HMGN1-210ENST00000464078 SCGB2A1O75556 95 aa12.43□□□□□ -0.42
HMGN1-210ENST00000464078 RNASE2P10153 161 aaKnown RBP12.43□□□□□ -0.42
HMGN1-210ENST00000464078 HLA-DMAP28067 261 aa12.43□□□□□ -0.42
HMGN1-210ENST00000464078 TSPAN5P62079 268 aa12.43□□□□□ -0.42
HMGN1-210ENST00000464078 LGALS9BQ3B8N2 356 aa12.43□□□□□ -0.42
HMGN1-210ENST00000464078 SPINK9Q5DT21 86 aa12.43□□□□□ -0.42
HMGN1-210ENST00000464078 ACTL10Q5JWF8 245 aa12.43□□□□□ -0.42
HMGN1-210ENST00000464078 SLC35G3Q8N808 338 aa12.43□□□□□ -0.42
HMGN1-210ENST00000464078 OR4X1Q8NH49 305 aa12.43□□□□□ -0.42
HMGN1-210ENST00000464078 GPX8Q8TED1 209 aa12.43□□□□□ -0.42
HMGN1-210ENST00000464078 NARS2Q96I59 477 aaKnown RBP12.43□□□□□ -0.42
HMGN1-210ENST00000464078 CLEC5AQ9NY25 188 aa12.43□□□□□ -0.42
HMGN1-210ENST00000464078 ABCA13Q86UQ4 5058 aa12.43□□□□□ -0.42
HMGN1-210ENST00000464078 HELTA6NFD8 242 aa12.42□□□□□ -0.42
HMGN1-210ENST00000464078 IGKV1-17P01599 117 aa12.42□□□□□ -0.42
HMGN1-210ENST00000464078 IGKV1-5P01602 117 aa12.42□□□□□ -0.42
HMGN1-210ENST00000464078 RPL5P46777 297 aaKnown RBP12.42□□□□□ -0.42
HMGN1-210ENST00000464078 EIF2B2P49770 351 aaKnown RBP12.42□□□□□ -0.42
HMGN1-210ENST00000464078 SUB1P53999 127 aaKnown RBP eCLIP12.42□□□□□ -0.42
HMGN1-210ENST00000464078 C1QTNF4Q9BXJ3 329 aa12.42□□□□□ -0.42
HMGN1-210ENST00000464078 FNDC4Q9H6D8 234 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-210ENST00000464078 MRPL36Q9P0J6 103 aaKnown RBP12.42□□□□□ -0.42
HMGN1-210ENST00000464078 U3KQE9 123 aa12.42□□□□□ -0.42
HMGN1-210ENST00000464078 A0A0B4J293 547 aa12.41□□□□□ -0.42
HMGN1-210ENST00000464078 PPP5CP53041 499 aa12.41□□□□□ -0.42
HMGN1-210ENST00000464078 IZUMO4Q1ZYL8 232 aa12.41□□□□□ -0.42
HMGN1-210ENST00000464078 BSXQ3C1V8 233 aa12.41□□□□□ -0.42
HMGN1-210ENST00000464078 SCPEP1Q9HB40 452 aa12.41□□□□□ -0.42
HMGN1-210ENST00000464078 CD74P04233 296 aa12.4□□□□□ -0.42
HMGN1-210ENST00000464078 OPRK1P41145 380 aa12.4□□□□□ -0.42
HMGN1-210ENST00000464078 RND3P61587 244 aa12.4□□□□□ -0.42
HMGN1-210ENST00000464078 NUTF2P61970 127 aaKnown RBP12.4□□□□□ -0.42
HMGN1-210ENST00000464078 GLMPQ8WWB7 406 aa12.4□□□□□ -0.42
HMGN1-210ENST00000464078 ZNF486Q96H40 463 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-210ENST00000464078 RAB40CQ96S21 281 aa12.4□□□□□ -0.42
HMGN1-210ENST00000464078 SCRT1Q9BWW7 348 aa12.4□□□□□ -0.42
HMGN1-210ENST00000464078 SEPSECSQ9HD40 501 aaKnown RBP12.4□□□□□ -0.42
HMGN1-210ENST00000464078 TRAV30A0A087WSZ9 112 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 IFNA17P01571 189 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 NPY1RP25929 384 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 RCVRNP35243 200 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 AKR1C2P52895 323 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 AP2S1P53680 142 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-210ENST00000464078 DHRS2Q13268 280 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 NEDD8Q15843 81 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 PSMG4Q5JS54 123 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 Q6ZR54 194 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 ZNF767PQ75MW2 155 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 TMEM230Q96A57 120 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 PDCD10Q9BUL8 212 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 Q9H521 79 aa12.39□□□□□ -0.43
HMGN1-210ENST00000464078 ATG12O94817 140 aa12.38□□□□□ -0.43
HMGN1-210ENST00000464078 TGFBR1P36897 503 aa12.38□□□□□ -0.43
HMGN1-210ENST00000464078 RPS19P39019 145 aaKnown RBP12.38□□□□□ -0.43
HMGN1-210ENST00000464078 HOXA1P49639 335 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-210ENST00000464078 C16orf54Q6UWD8 224 aa12.38□□□□□ -0.43
HMGN1-210ENST00000464078 FAM210BQ96KR6 192 aa12.38□□□□□ -0.43
HMGN1-210ENST00000464078 NEU1Q99519 415 aa12.38□□□□□ -0.43
HMGN1-210ENST00000464078 FAM90A26D6RGX4 464 aa12.37□□□□□ -0.43
HMGN1-210ENST00000464078 M0R2N4 97 aa12.37□□□□□ -0.43
HMGN1-210ENST00000464078 IGLC1P0CG04 106 aa12.37□□□□□ -0.43
HMGN1-210ENST00000464078 ETV6P41212 452 aa12.37□□□□□ -0.43
HMGN1-210ENST00000464078 SNRPD3P62318 126 aaKnown RBP12.37□□□□□ -0.43
HMGN1-210ENST00000464078 TIGITQ495A1 244 aa12.37□□□□□ -0.43
HMGN1-210ENST00000464078 AARDQ4LEZ3 155 aa12.37□□□□□ -0.43
HMGN1-210ENST00000464078 ZNF705AQ6ZN79 300 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-210ENST00000464078 TP53RKQ96S44 253 aa12.37□□□□□ -0.43
HMGN1-210ENST00000464078 TMEM189A5PLL7 270 aa12.36□□□□□ -0.43
HMGN1-210ENST00000464078 ZNF705FA8MVS1 300 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-210ENST00000464078 H3BMM0 161 aa12.36□□□□□ -0.43
HMGN1-210ENST00000464078 APOA1P02647 267 aa12.36□□□□□ -0.43
HMGN1-210ENST00000464078 HNRNPCP07910 306 aaKnown RBP eCLIP12.36□□□□□ -0.435e-6■■■□□ 18.1
HMGN1-210ENST00000464078 ZNF705DP0CH99 300 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-210ENST00000464078 ZNF705BP0CI00 300 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-210ENST00000464078 PIGPP57054 158 aa12.36□□□□□ -0.43
HMGN1-210ENST00000464078 YPEL3P61236 119 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-210ENST00000464078 LHFPL1Q86WI0 220 aa12.36□□□□□ -0.43
HMGN1-210ENST00000464078 OR1S2Q8NGQ3 325 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms