RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 RHEBQ15382 184 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 RNASE10Q5GAN6 216 aaKnown RBP3.51□□□□□ -1.85
COPS3-205ENST00000463097 FAM74A1Q5RGS3 127 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 HIST2H3PS2Q5TEC6 136 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 RPL22L1Q6P5R6 122 aaKnown RBP3.51□□□□□ -1.85
COPS3-205ENST00000463097 ZNF880Q6PDB4 577 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 Q6ZRU5 148 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 KRTAP11-1Q8IUC1 163 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 BAP18Q8IXM2 172 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 AMN1Q8IY45 258 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 ST20-AS1Q8NBB2 130 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 GPR32P1Q8NGA4 272 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 RPS4Y2Q8TD47 263 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 APOBEC3DQ96AK3 386 aaPredicted RBP3.51□□□□□ -1.85
COPS3-205ENST00000463097 SHANK2-AS3Q9BTD1 123 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 PLA2G12AQ9BZM1 189 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 LINC00527Q9UJ94 153 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 POLR1DQ9Y2S0 133 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 PCYT1BQ9Y5K3 369 aaPredicted RBP3.51□□□□□ -1.85
COPS3-205ENST00000463097 RALGAPA2Q2PPJ7 1873 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 UBR3Q6ZT12 1888 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 PLXNA1Q9UIW2 1896 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 ZSWIM8A7E2V4 1837 aa3.51□□□□□ -1.85
COPS3-205ENST00000463097 A0A087WUJ7 227 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 FXYD6-FXYD2A0A087WZ82 144 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 TRAV14DV4A0A0A6YYC5 116 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 OR5H14A6NHG9 310 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 IGLL5B9A064 214 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 TSTD3H0UI37 97 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 M0QZK8 103 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 FADS1O60427 444 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 GGCTO75223 188 aaKnown RBP3.5□□□□□ -1.85
COPS3-205ENST00000463097 SIX6O95475 246 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 IGF2P01344 180 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 LTAP01374 205 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 AKAIN1P0CW23 69 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 CBR1P16152 277 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 ZNF14P17017 642 aaPredicted RBP3.5□□□□□ -1.85
COPS3-205ENST00000463097 HMGA1P17096 107 aaKnown RBP3.5□□□□□ -1.85
COPS3-205ENST00000463097 CRABP1P29762 137 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 DDTP30046 118 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 PSMB3P49720 205 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 TCL1AP56279 114 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 REEP5Q00765 189 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 ENDOGQ14249 297 aaKnown RBP3.5□□□□□ -1.85
COPS3-205ENST00000463097 MMDQ15546 238 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 C1orf195Q5TG92 126 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 HES3Q5TGS1 186 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 SLC25A34Q6PIV7 304 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 TMEM144Q7Z5S9 345 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 DAZ4Q86SG3 579 aaKnown RBP3.5□□□□□ -1.85
COPS3-205ENST00000463097 TRAPPC5Q8IUR0 188 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 ZFP82Q8N141 532 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 TMEM75Q8N9X5 138 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 TMEM229BQ8NBD8 167 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 OR1P1Q8NH06 330 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 OR51H1Q8NH63 302 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 OR7D2Q96RA2 312 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 LYSMD1Q96S90 227 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 EFCAB11Q9BUY7 163 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 FXYD6Q9H0Q3 95 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 GTSF1LQ9H1H1 148 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 OR51I1Q9H343 314 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 DAZ1Q9NQZ3 744 aaKnown RBP3.5□□□□□ -1.85
COPS3-205ENST00000463097 CACFD1Q9UGQ2 172 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 DKKL1Q9UK85 242 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 SLC22A13Q9Y226 551 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 HDGFL3Q9Y3E1 203 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 COL16A1Q07092 1604 aaPredicted RBP3.5□□□□□ -1.85
COPS3-205ENST00000463097 TRIP11Q15643 1979 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 OTOFQ9HC10 1997 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 ADAMTSL1Q8N6G6 1762 aa3.5□□□□□ -1.85
COPS3-205ENST00000463097 PDCD11Q14690 1871 aaKnown RBP3.5□□□□□ -1.85
COPS3-205ENST00000463097 COL11A1P12107 1806 aaPredicted RBP3.49□□□□□ -1.85
COPS3-205ENST00000463097 ANKRD12Q6UB98 2062 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 MYO18AQ92614 2054 aaKnown RBP3.49□□□□□ -1.85
COPS3-205ENST00000463097 IGKV2D-24A0A075B6R9 120 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 A0A087WUU8 490 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 A0A087WWC5 75 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 IGHV3-21A0A0B4J1V1 117 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 IFITM5A6NNB3 132 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 HCRTO43612 131 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 ZNF324O75467 553 aaPredicted RBP3.49□□□□□ -1.85
COPS3-205ENST00000463097 C1QCP02747 245 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 OPN1SWP03999 348 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 IFNA6P05013 189 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 CD2P06729 351 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 OR4A8P0C604 315 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 METTL15P1P0C7V9 234 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 HIST1H1EP10412 219 aaKnown RBP3.49□□□□□ -1.85
COPS3-205ENST00000463097 OMPP47874 163 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 LSM6P62312 80 aaKnown RBP3.49□□□□□ -1.85
COPS3-205ENST00000463097 CDK5R1Q15078 307 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 EBPQ15125 230 aaKnown RBP3.49□□□□□ -1.85
COPS3-205ENST00000463097 TMEM176BQ3YBM2 270 aaPredicted RBP3.49□□□□□ -1.85
COPS3-205ENST00000463097 OR10K2Q6IF99 312 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 EBLN2Q6P2I7 272 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 OSR2Q8N2R0 312 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 APCDD1LQ8NCL9 501 aa3.49□□□□□ -1.85
COPS3-205ENST00000463097 OR2T27Q8NH04 317 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms