RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 NAV3Q8IVL0 2385 aa13.68□□□□□ -0.22
ACTB-207ENST00000462494 PYYP10082 97 aa13.68□□□□□ -0.22
ACTB-207ENST00000462494 SUB1P53999 127 aaKnown RBP eCLIP13.68□□□□□ -0.223e-16■■□□□ 12.8
ACTB-207ENST00000462494 SSX2Q16385 188 aa13.68□□□□□ -0.22
ACTB-207ENST00000462494 PRR30Q53SZ7 412 aaPredicted RBP13.68□□□□□ -0.22
ACTB-207ENST00000462494 OR4A5Q8NH83 315 aa13.68□□□□□ -0.22
ACTB-207ENST00000462494 FAM167A-AS1Q96KT0 104 aa13.68□□□□□ -0.22
ACTB-207ENST00000462494 SERTAD4Q9NUC0 356 aa13.68□□□□□ -0.22
ACTB-207ENST00000462494 JKAMPQ9P055 326 aa13.68□□□□□ -0.22
ACTB-207ENST00000462494 PSMB11A5LHX3 300 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 TNFRSF13BO14836 293 aaPredicted RBP13.67□□□□□ -0.22
ACTB-207ENST00000462494 SELENOTP62341 195 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 PRB3Q04118 309 aaPredicted RBP13.67□□□□□ -0.22
ACTB-207ENST00000462494 C10orf113Q5VZT2 155 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 ASCL5Q7RTU5 278 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 ST6GALNAC6Q969X2 333 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 LINC00479Q96M42 142 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 ZNF355PQ9NSJ1 428 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 TP53TG3Q9ULZ0 132 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 E7EQL1 145 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 PAX1P15863 534 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 DLX1P56177 255 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 VMA21Q3ZAQ7 101 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 BAGE3Q86Y29 109 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 BAGE2Q86Y30 109 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 ST6GALNAC3Q8NDV1 305 aa13.67□□□□□ -0.22
ACTB-207ENST00000462494 SERF1AO75920 110 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 APELAP0DMC3 54 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 CD33P20138 364 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 PPOXP50336 477 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 IBA57Q5T440 356 aaKnown RBP13.66□□□□□ -0.22
ACTB-207ENST00000462494 ASPHD1Q5U4P2 390 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 LINC00311Q8N616 119 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 RNF2Q99496 336 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 PAXXQ9BUH6 204 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 MRPL36Q9P0J6 103 aaKnown RBP13.66□□□□□ -0.22
ACTB-207ENST00000462494 PLXNB1O43157 2135 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 SHISA9B4DS77 424 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 INS-IGF2F8WCM5 200 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 PLAUP00749 431 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 IGLV2-8P01709 118 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 IGHV1-8P0DP01 117 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 RAB4BP61018 213 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 HCP5Q6MZN7 132 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 FAM71F2Q6NXP2 309 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 OSTCQ9NRP0 149 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 NAT8BQ9UHF3 227 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 NAGKQ9UJ70 344 aa13.66□□□□□ -0.22
ACTB-207ENST00000462494 APC2O95996 2303 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 A0A1B0GV90 55 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 A0A1W2PPI3 338 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 TCRBV4S1A1TA0A5B7 111 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 F2Z2F3 143 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 DLX6P56179 175 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 TMEM155Q4W5P6 130 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 PATE2Q6UY27 113 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 OR1L4Q8NGR5 311 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 ZNF596Q8TC21 504 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 MISP3Q96FF7 219 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 IGF2BP2-AS1Q96M15 143 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 SSUH2Q9Y2M2 353 aa13.65□□□□□ -0.22
ACTB-207ENST00000462494 IGKV1D-37A0A075B6S9 117 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 ZNF705FA8MVS1 300 aaPredicted RBP13.64□□□□□ -0.23
ACTB-207ENST00000462494 ZNF705DP0CH99 300 aaPredicted RBP13.64□□□□□ -0.23
ACTB-207ENST00000462494 ZNF705BP0CI00 300 aaPredicted RBP13.64□□□□□ -0.23
ACTB-207ENST00000462494 TPPP2P59282 170 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 BPIFB3P59826 476 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 CX3CL1P78423 397 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 C8orf31Q8N9H6 132 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 GNB1LQ9BYB4 327 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 NGBQ9NPG2 151 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 IGHV1-69-2A0A0G2JMI3 117 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 ISLRO14498 428 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 CA1P00915 261 aaPredicted RBP13.64□□□□□ -0.23
ACTB-207ENST00000462494 MC5RP33032 325 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 LINC00310P59036 64 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 USF2Q15853 346 aaPredicted RBP13.64□□□□□ -0.23
ACTB-207ENST00000462494 KIAA1644Q3SXP7 199 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 LHFPL4Q7Z7J7 247 aa13.64□□□□□ -0.23
ACTB-207ENST00000462494 AMMECR1Q9Y4X0 333 aaPredicted RBP13.64□□□□□ -0.23
ACTB-207ENST00000462494 TRAV34A0A0B4J273 112 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 MOSP00540 346 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 ORM2P19652 201 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 RPL19P84098 196 aaKnown RBP13.63□□□□□ -0.23
ACTB-207ENST00000462494 MRPL54Q6P161 138 aaKnown RBP13.63□□□□□ -0.23
ACTB-207ENST00000462494 C19orf35Q6ZS72 473 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 LINC00305Q7Z4B0 112 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 DMRTC2Q8IXT2 367 aaPredicted RBP13.63□□□□□ -0.23
ACTB-207ENST00000462494 NDUFAF3Q9BU61 184 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 TMEM133Q9H2Q1 129 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 TRBV9A0A0B4J1U6 114 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 IGHV3-21A0A0B4J1V1 117 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 LYNX1G3V0Z9 82 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 LYNX1P0DP58 116 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 RUSC1-AS1Q66K80 236 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 SAMD10Q9BYL1 202 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 KAAG1Q9UBP8 84 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 ZNF835Q9Y2P0 537 aa13.63□□□□□ -0.23
ACTB-207ENST00000462494 POLR3KQ9Y2Y1 108 aaPredicted RBP13.63□□□□□ -0.23
ACTB-207ENST00000462494 CNTFRP26992 372 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms