RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 NPPCP23582 126 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 CRYBB3P26998 211 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 SUB1P53999 127 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMPD4-216ENST00000461187 PRR20EP86478 221 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 PRR20CP86479 221 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 PRR20DP86480 221 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 PRR20BP86481 221 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 PRR20AP86496 221 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 RNASE10Q5GAN6 216 aaKnown RBP10.7□□□□□ -0.7
SMPD4-216ENST00000461187 STHQ8IWL8 128 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 ARRDC1Q8N5I2 433 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 Q8NAQ8 132 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 OR52I2Q8NH67 350 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 C2CD4CQ8TF44 421 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 PDCD10Q9BUL8 212 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 KRTAP17-1Q9BYP8 105 aa10.7□□□□□ -0.7
SMPD4-216ENST00000461187 A0A1W2PS18 150 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 FAM25AB3EWG3 89 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 FAM25CB3EWG5 89 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 FAM25GB3EWG6 89 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 ATG12O94817 140 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 OPRK1P41145 380 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 RPL5P46777 297 aaKnown RBP10.69□□□□□ -0.7
SMPD4-216ENST00000461187 HOXA1P49639 335 aaPredicted RBP10.69□□□□□ -0.7
SMPD4-216ENST00000461187 RORCP51449 518 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 PPP5CP53041 499 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 BSXQ3C1V8 233 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 SP6Q3SY56 376 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 TRPT1Q86TN4 253 aaKnown RBP10.69□□□□□ -0.7
SMPD4-216ENST00000461187 OR4D10Q8NGI6 311 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 OR4X1Q8NH49 305 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 GRAMD2BQ96HH9 432 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 METTL26Q96S19 204 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 MTFP1Q9UDX5 166 aa10.69□□□□□ -0.7
SMPD4-216ENST00000461187 IGKV1-17P01599 117 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 RBMY1A1P0DJD3 496 aaKnown RBP10.68□□□□□ -0.7
SMPD4-216ENST00000461187 RBMY1CP0DJD4 496 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 TBPP20226 339 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 UCP1P25874 307 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 P2RY1P47900 373 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 TCTAP57738 103 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 RBMY1FQ15415 496 aaKnown RBP10.68□□□□□ -0.7
SMPD4-216ENST00000461187 TRIM16LQ309B1 348 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 MZT2AQ6P582 158 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 Q6ZRM9 215 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 STXBP6Q8NFX7 210 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 TERB2Q8NHR7 220 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 HRH4Q9H3N8 390 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 ENY2Q9NPA8 101 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 COPZ2Q9P299 210 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 APLNQ9ULZ1 77 aa10.68□□□□□ -0.7
SMPD4-216ENST00000461187 ZNF688P0C7X2 276 aa10.67□□□□□ -0.7
SMPD4-216ENST00000461187 TIGITQ495A1 244 aa10.67□□□□□ -0.7
SMPD4-216ENST00000461187 AARDQ4LEZ3 155 aa10.67□□□□□ -0.7
SMPD4-216ENST00000461187 CCDC71LQ8N9Z2 235 aa10.67□□□□□ -0.7
SMPD4-216ENST00000461187 OR13C8Q8NGS7 320 aa10.67□□□□□ -0.7
SMPD4-216ENST00000461187 ZFAND1Q8TCF1 268 aa10.67□□□□□ -0.7
SMPD4-216ENST00000461187 TMEM230Q96A57 120 aa10.67□□□□□ -0.7
SMPD4-216ENST00000461187 RRNAD1Q96FB5 475 aaKnown RBP10.67□□□□□ -0.7
SMPD4-216ENST00000461187 ABHD1Q96SE0 405 aa10.67□□□□□ -0.7
SMPD4-216ENST00000461187 EXTL2Q9UBQ6 330 aa10.67□□□□□ -0.7
SMPD4-216ENST00000461187 IGHV4-28A0A0C4DH34 117 aa10.66□□□□□ -0.7
SMPD4-216ENST00000461187 KNCNA6PVL3 124 aa10.66□□□□□ -0.7
SMPD4-216ENST00000461187 ZNF705EA8MWA4 302 aaPredicted RBP10.66□□□□□ -0.7
SMPD4-216ENST00000461187 IGLL5B9A064 214 aa10.66□□□□□ -0.7
SMPD4-216ENST00000461187 CD74P04233 296 aa10.66□□□□□ -0.7
SMPD4-216ENST00000461187 SPP1P10451 314 aa10.66□□□□□ -0.7
SMPD4-216ENST00000461187 C4BPBP20851 252 aa10.66□□□□□ -0.7
SMPD4-216ENST00000461187 SPCS3P61009 180 aa10.66□□□□□ -0.7
SMPD4-216ENST00000461187 TMEM41BQ5BJD5 291 aa10.66□□□□□ -0.7
SMPD4-216ENST00000461187 MORN3Q6PF18 240 aaPredicted RBP10.66□□□□□ -0.7
SMPD4-216ENST00000461187 TMEM229BQ8NBD8 167 aa10.66□□□□□ -0.7
SMPD4-216ENST00000461187 RNASE11Q8TAA1 199 aaKnown RBP10.66□□□□□ -0.7
SMPD4-216ENST00000461187 MARCH1Q8TCQ1 289 aa10.66□□□□□ -0.7
SMPD4-216ENST00000461187 NAA50Q9GZZ1 169 aaKnown RBP10.66□□□□□ -0.7
SMPD4-216ENST00000461187 U3KQE9 123 aa10.66□□□□□ -0.7
SMPD4-216ENST00000461187 X6R8D5 127 aa10.66□□□□□ -0.7
SMPD4-216ENST00000461187 HERC2O95714 4834 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 TRAV30A0A087WSZ9 112 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 C11orf94C9JXX5 98 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 SCGB2A1O75556 95 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 B3GALNT1O75752 331 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 CDS2O95674 445 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 MIFP14174 115 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 ZNF182P17025 639 aaPredicted RBP10.65□□□□□ -0.7
SMPD4-216ENST00000461187 CTF1Q16619 201 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 SCGB2B2Q4G0G5 96 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 OR52E5Q8NH55 327 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 LHFPL5Q8TAF8 219 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 AP3S1Q92572 193 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 NARS2Q96I59 477 aaKnown RBP10.65□□□□□ -0.7
SMPD4-216ENST00000461187 TMEM222Q9H0R3 208 aa10.65□□□□□ -0.7
SMPD4-216ENST00000461187 MUC4Q99102 2169 aa10.65□□□□□ -0.71
SMPD4-216ENST00000461187 ELOA3CA0A087WX78 387 aaPredicted RBP10.64□□□□□ -0.71
SMPD4-216ENST00000461187 RAB3DO95716 219 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 OR5AC1P0C628 307 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 IGLC1P0CG04 106 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 HLA-DMBP28068 263 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 HTR2BP41595 481 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms