RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 PCYT1BQ9Y5K3 369 aaPredicted RBP1.33□□□□□ -2.2
RFC4-211ENST00000460408 EXPH5Q8NEV8 1989 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 TRPC5OSA6NMA1 111 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 C2orf74A8MZ97 194 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 TOR1AO14656 332 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 SOD1P00441 154 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 MSMBP08118 114 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 BLVRBP30043 206 aaPredicted RBP1.32□□□□□ -2.2
RFC4-211ENST00000460408 HAAOP46952 286 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 LINC00313P59037 77 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 KRTAP12-1P59990 96 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 B2MP61769 119 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 SLC35A2P78381 396 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 GNA12Q03113 381 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 EMX1Q04741 257 aaPredicted RBP1.32□□□□□ -2.2
RFC4-211ENST00000460408 FAM45BPQ6NSW5 357 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 FAM173BQ6P4H8 233 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 SPATA24Q86W54 205 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 RPS19BP1Q86WX3 136 aaKnown RBP1.32□□□□□ -2.2
RFC4-211ENST00000460408 DEFB106AQ8N104 65 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 KRT222Q8N1A0 295 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 TNFAIP8L1Q8WVP5 186 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 LRRC45Q96CN5 670 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 ATP6V1G3Q96LB4 118 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 TTTY12Q9BZ98 90 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 BPESC1Q9GZL8 116 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 SMDT1Q9H4I9 107 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 UBQLN4Q9NRR5 601 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 TAS2R9Q9NYW1 312 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 PSORS1C2Q9UIG4 136 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 TIMM22Q9Y584 194 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 CCDC88CQ9P219 2028 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 MUC2Q02817 5179 aa1.32□□□□□ -2.2
RFC4-211ENST00000460408 MYH11P35749 1972 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 DOCK4Q8N1I0 1966 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 GOLGA8RI6L899 631 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 LIN7AO14910 233 aaPredicted RBP1.31□□□□□ -2.2
RFC4-211ENST00000460408 CRTAPO75718 401 aaPredicted RBP1.31□□□□□ -2.2
RFC4-211ENST00000460408 ZNF189O75820 626 aaPredicted RBP1.31□□□□□ -2.2
RFC4-211ENST00000460408 S100A6P06703 90 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 CRHP06850 196 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 PAEPP09466 180 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 OR4A8P0C604 315 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 CDK2P24941 298 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 CASP1P29466 404 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 GABRA4P48169 554 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 SULT1A2P50226 295 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 AKR1C2P52895 323 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 FGF12P61328 243 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 SNRPFP62306 86 aaKnown RBP1.31□□□□□ -2.2
RFC4-211ENST00000460408 SARNPP82979 210 aaKnown RBP1.31□□□□□ -2.2
RFC4-211ENST00000460408 PDK2Q15119 407 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 MAPK14Q16539 360 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 C4orf26Q17RF5 130 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 DEFB110Q30KQ9 67 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 SPATA31B1PQ5VZV4 182 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 ZNF767PQ75MW2 155 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 SSX8Q7RTT4 187 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 FAM9CQ8IZT9 166 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 CNEP1R1Q8N9A8 125 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 OR5L1Q8NGL2 311 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 OR4C16Q8NGL9 310 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 OR51H1Q8NH63 302 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 STOML3Q8TAV4 291 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 LCN9Q8WX39 176 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 SLC35B4Q969S0 331 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 COX14Q96I36 57 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 ZNF251Q9BRH9 671 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 LLPHQ9BRT6 129 aaKnown RBP1.31□□□□□ -2.2
RFC4-211ENST00000460408 C11orf1Q9H5F2 150 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 LRRC19Q9H756 370 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 IL20Q9NYY1 176 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 CD300AQ9UGN4 299 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 BOKQ9UMX3 212 aaPredicted RBP1.31□□□□□ -2.2
RFC4-211ENST00000460408 C15orf41Q9Y2V0 281 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 NINQ8N4C6 2090 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 PKHD1P08F94 4074 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 DNAH3Q8TD57 4116 aa1.31□□□□□ -2.2
RFC4-211ENST00000460408 DNAH10Q8IVF4 4471 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 TRGV4A0A0C4DH28 118 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 C19orf71A6NCJ1 209 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 CETN3O15182 167 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 YEATS4O95619 227 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 IFNA6P05013 189 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 RPSAP08865 295 aaKnown RBP1.3□□□□□ -2.2
RFC4-211ENST00000460408 NQO1P15559 274 aaKnown RBP1.3□□□□□ -2.2
RFC4-211ENST00000460408 ZNF7P17097 686 aaPredicted RBP1.3□□□□□ -2.2
RFC4-211ENST00000460408 ORM2P19652 201 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 PVALBP20472 110 aaPredicted RBP1.3□□□□□ -2.2
RFC4-211ENST00000460408 AGTR1P30556 359 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 OR1E2P47887 323 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 SNRPD2P62316 118 aaKnown RBP1.3□□□□□ -2.2
RFC4-211ENST00000460408 ZNF117Q03924 483 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 C1DQ13901 141 aaKnown RBP1.3□□□□□ -2.2
RFC4-211ENST00000460408 SS18Q15532 418 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 PCOTHQ58A44 107 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 MESTQ5EB52 335 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 BRMS1LQ5PSV4 323 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 NCMAPQ5T1S8 102 aa1.3□□□□□ -2.2
RFC4-211ENST00000460408 PLCZ1Q86YW0 608 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms