RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CXorf58Q96LI9 332 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 TMEM68Q96MH6 324 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 NPCDR1Q9BY65 106 aa7.11□□□□□ -1.27
VPS50-207ENST00000458530 F11RQ9Y624 299 aaKnown RBP7.11□□□□□ -1.27
VPS50-207ENST00000458530 IGHV3OR16-10A0A075B7F0 116 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 A0A0U1RQK1 487 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 CGB1A6NKQ9 187 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 NPIPB5A8MRT5 1133 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 TEX22C9J3V5 150 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 TSPAN15O95858 294 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 IGHV4-38-2P0DP08 117 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 DEFA4P12838 97 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 MDKP21741 143 aaPredicted RBP7.1□□□□□ -1.27
VPS50-207ENST00000458530 WT1-ASQ06250 92 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 MRGPRG-AS1Q2M3A8 158 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 EIF4E3Q8N5X7 224 aaKnown RBP7.1□□□□□ -1.27
VPS50-207ENST00000458530 TMEM170AQ8WVE7 144 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 PCNPQ8WW12 178 aaKnown RBP7.1□□□□□ -1.27
VPS50-207ENST00000458530 C17orf50Q8WW18 174 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 WFDC12Q8WWY7 111 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 MARC2Q969Z3 335 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 RBMXL1Q96E39 390 aaKnown RBP7.1□□□□□ -1.27
VPS50-207ENST00000458530 AJUBAQ96IF1 538 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 RBM14Q96PK6 669 aaKnown RBP7.1□□□□□ -1.27
VPS50-207ENST00000458530 P2RX4Q99571 388 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 SLC25A33Q9BSK2 321 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 RSG1Q9BU20 258 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 PBDC1Q9BVG4 233 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 THYN1Q9P016 225 aa7.1□□□□□ -1.27
VPS50-207ENST00000458530 PKD1L1Q8TDX9 2849 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 FABP1P07148 127 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 H2AFB1P0C5Y9 115 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 HIST1H1BP16401 226 aaKnown RBP7.09□□□□□ -1.27
VPS50-207ENST00000458530 M6PRP20645 277 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 CD24P25063 80 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 CX3CL1P78423 397 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 FFAR4Q5NUL3 377 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 PVRIGQ6DKI7 326 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 C9orf139Q6ZV77 190 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 Q8N9W7 124 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 OR5R1Q8NH85 324 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 MISP3Q96FF7 219 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 CITED4Q96RK1 184 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 SSX3Q99909 188 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 SSBP4Q9BWG4 385 aaPredicted RBP7.09□□□□□ -1.27
VPS50-207ENST00000458530 HRH4Q9H3N8 390 aa7.09□□□□□ -1.27
VPS50-207ENST00000458530 LSM4Q9Y4Z0 139 aaKnown RBP7.09□□□□□ -1.27
VPS50-207ENST00000458530 CTXND1A0A1B0GTU2 59 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 MFSD2BA6NFX1 497 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 E7EUB6 86 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 FCN1O00602 326 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 AGPAT2O15120 278 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 MT-CO2P00403 227 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 IFNA1P01562 189 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 AREGP15514 252 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 CTRB1P17538 263 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 RPL29P47914 159 aaKnown RBP7.08□□□□□ -1.28
VPS50-207ENST00000458530 ELLP55199 621 aaPredicted RBP7.08□□□□□ -1.28
VPS50-207ENST00000458530 SELENOTP62341 195 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 SRSF2Q01130 221 aaKnown RBP7.08□□□□□ -1.28
VPS50-207ENST00000458530 SCGB2A2Q13296 93 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 KLF17Q5JT82 389 aaPredicted RBP7.08□□□□□ -1.28
VPS50-207ENST00000458530 FAM120AOSQ5T036 256 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 CTRB2Q6GPI1 263 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 C5orf56Q8N8D9 126 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 SGMS2Q8NHU3 365 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 LYPD6BQ8NI32 183 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 GGTLC1Q9BX51 225 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 ACTR3CQ9C0K3 210 aaPredicted RBP7.08□□□□□ -1.28
VPS50-207ENST00000458530 PXMP4Q9Y6I8 212 aa7.08□□□□□ -1.28
VPS50-207ENST00000458530 IGHV7-81A0A0B4J1V7 117 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 TRAV1-1A0A0B4J248 108 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 A0A1B0GW64 132 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 SCO2A0A1W2PP80 73 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 A0A1W2PPV4 95 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 KRBOX1C9JBD0 128 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 H3BUX3 64 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 I3L521 148 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 FSHBP01225 129 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 REG1AP05451 166 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 CRYGCP07315 174 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 HNF1AP20823 631 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 PAX6P26367 422 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 TAGLN2P37802 199 aaKnown RBP7.07□□□□□ -1.28
VPS50-207ENST00000458530 PPT1P50897 306 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 B2MP61769 119 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 SSBP2P81877 361 aaPredicted RBP7.07□□□□□ -1.28
VPS50-207ENST00000458530 GAMTQ14353 236 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 TTC9CQ8N5M4 171 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 OR10G4Q8NGN3 311 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 OR10G9Q8NGN4 311 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 OR10G7Q8NGN6 311 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 ACY3Q96HD9 319 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 RNF2Q99496 336 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 MGST2Q99735 147 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 WNT10AQ9GZT5 417 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 SMDT1Q9H4I9 107 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 RPRMQ9NS64 109 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 SLC39A9Q9NUM3 307 aa7.07□□□□□ -1.28
VPS50-207ENST00000458530 MAP1LC3B2A6NCE7 125 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms