RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 C7orf50Q9BRJ6 194 aaKnown RBP13.65□□□□□ -0.22
PDLIM2-215ENST00000456545 K7EMT4 169 aa13.64□□□□□ -0.23
PDLIM2-215ENST00000456545 IFNA10P01566 189 aa13.64□□□□□ -0.23
PDLIM2-215ENST00000456545 C8orf88P0DMB2 117 aa13.64□□□□□ -0.23
PDLIM2-215ENST00000456545 PPP1R1AQ13522 171 aa13.64□□□□□ -0.23
PDLIM2-215ENST00000456545 NMSQ5H8A3 153 aa13.64□□□□□ -0.23
PDLIM2-215ENST00000456545 SLC16A13Q7RTY0 426 aa13.64□□□□□ -0.23
PDLIM2-215ENST00000456545 SBSPONQ8IVN8 264 aa13.64□□□□□ -0.23
PDLIM2-215ENST00000456545 SLC24A4Q8NFF2 622 aa13.64□□□□□ -0.23
PDLIM2-215ENST00000456545 SDHCQ99643 169 aaPredicted RBP13.64□□□□□ -0.23
PDLIM2-215ENST00000456545 ZMAT4Q9H898 229 aa13.64□□□□□ -0.23
PDLIM2-215ENST00000456545 U3KQK5 164 aa13.64□□□□□ -0.23
PDLIM2-215ENST00000456545 TRAV25A0A0B4J276 109 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 C15orf62A8K5M9 175 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 NDUFB6O95139 128 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 TMEM50AO95807 157 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 UBE2MP61081 183 aaKnown RBP13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 TNFRSF9Q07011 255 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 MLANAQ16655 118 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 C2orf83Q53S99 150 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 TMEM61Q8N0U2 210 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 OR52B4Q8NGK2 314 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 DTD1Q8TEA8 209 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 GINS3Q9BRX5 216 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 RBKSQ9H477 322 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 TMED3Q9Y3Q3 217 aa13.63□□□□□ -0.23
PDLIM2-215ENST00000456545 HOXB5P09067 269 aa13.62□□□□□ -0.23
PDLIM2-215ENST00000456545 NPY1RP25929 384 aa13.62□□□□□ -0.23
PDLIM2-215ENST00000456545 PVRIGQ6DKI7 326 aa13.62□□□□□ -0.23
PDLIM2-215ENST00000456545 ETFRF1Q6IPR1 90 aa13.62□□□□□ -0.23
PDLIM2-215ENST00000456545 LRTM2Q8N967 370 aa13.62□□□□□ -0.23
PDLIM2-215ENST00000456545 RNASEH2CQ8TDP1 164 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-215ENST00000456545 HSPB7Q9UBY9 170 aa13.62□□□□□ -0.23
PDLIM2-215ENST00000456545 U3KQ87 197 aa13.62□□□□□ -0.23
PDLIM2-215ENST00000456545 TRAV30A0A087WSZ9 112 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 TRAV14DV4A0A0A6YYC5 116 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 A8MZ25 164 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 CLN5O75503 358 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 CD7P09564 240 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 CNPY1Q3B7I2 92 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 BSXQ3C1V8 233 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 C4orf46Q504U0 113 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 ZNF600Q6ZNG1 722 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 TMEM116Q8NCL8 245 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 COQ8AQ8NI60 647 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 FNDC4Q9H6D8 234 aaPredicted RBP13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 C19orf73Q9NVV2 129 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 FLVCR2Q9UPI3 526 aa13.61□□□□□ -0.23
PDLIM2-215ENST00000456545 C9orf170A2RU37 121 aa13.6□□□□□ -0.23
PDLIM2-215ENST00000456545 OR11H12B2RN74 326 aa13.6□□□□□ -0.23
PDLIM2-215ENST00000456545 MED6O75586 246 aa13.6□□□□□ -0.23
PDLIM2-215ENST00000456545 IFNA4P05014 189 aa13.6□□□□□ -0.23
PDLIM2-215ENST00000456545 SLC25A4P12235 298 aa13.6□□□□□ -0.23
PDLIM2-215ENST00000456545 BMI1P35226 326 aa13.6□□□□□ -0.23
PDLIM2-215ENST00000456545 OR4X1Q8NH49 305 aa13.6□□□□□ -0.23
PDLIM2-215ENST00000456545 S100ZQ8WXG8 99 aa13.6□□□□□ -0.23
PDLIM2-215ENST00000456545 SMPXQ9UHP9 88 aa13.6□□□□□ -0.23
PDLIM2-215ENST00000456545 IGHV3-49A0A0A0MS15 119 aa13.59□□□□□ -0.23
PDLIM2-215ENST00000456545 IGHV7-4-1A0A0J9YVY3 117 aa13.59□□□□□ -0.23
PDLIM2-215ENST00000456545 LYRM1O43325 122 aa13.59□□□□□ -0.23
PDLIM2-215ENST00000456545 IFNA21P01568 189 aa13.59□□□□□ -0.23
PDLIM2-215ENST00000456545 OR4E1P0C645 316 aa13.59□□□□□ -0.23
PDLIM2-215ENST00000456545 SLC25A6P12236 298 aa13.59□□□□□ -0.23
PDLIM2-215ENST00000456545 TOMM20LQ6UXN7 152 aa13.59□□□□□ -0.23
PDLIM2-215ENST00000456545 DEFB125Q8N687 156 aa13.59□□□□□ -0.23
PDLIM2-215ENST00000456545 RHPN1-AS1Q9BWJ2 59 aa13.59□□□□□ -0.23
PDLIM2-215ENST00000456545 PAIP2BQ9ULR5 123 aaKnown RBP13.59□□□□□ -0.23
PDLIM2-215ENST00000456545 PUS1Q9Y606 427 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDLIM2-215ENST00000456545 ANXA7P20073 488 aaKnown RBP13.58□□□□□ -0.24
PDLIM2-215ENST00000456545 RND2P52198 227 aa13.58□□□□□ -0.24
PDLIM2-215ENST00000456545 ATP5IP56385 69 aaPredicted RBP13.58□□□□□ -0.24
PDLIM2-215ENST00000456545 GGNBP1Q5YKI7 109 aa13.58□□□□□ -0.24
PDLIM2-215ENST00000456545 LINC00299Q6ZSB3 139 aa13.58□□□□□ -0.24
PDLIM2-215ENST00000456545 LYG2Q86SG7 212 aa13.58□□□□□ -0.24
PDLIM2-215ENST00000456545 OR10C1Q96KK4 312 aa13.58□□□□□ -0.24
PDLIM2-215ENST00000456545 WWC2-AS2Q96NR7 200 aa13.58□□□□□ -0.24
PDLIM2-215ENST00000456545 SPAG8Q99932 426 aaPredicted RBP13.58□□□□□ -0.24
PDLIM2-215ENST00000456545 CCDC32Q9BV29 185 aa13.58□□□□□ -0.24
PDLIM2-215ENST00000456545 SRD5A3Q9H8P0 318 aa13.58□□□□□ -0.24
PDLIM2-215ENST00000456545 IGHV3OR16-13A0A075B7E8 117 aa13.57□□□□□ -0.24
PDLIM2-215ENST00000456545 IGHV3-74A0A0B4J1X5 117 aa13.57□□□□□ -0.24
PDLIM2-215ENST00000456545 A6NHS1 94 aa13.57□□□□□ -0.24
PDLIM2-215ENST00000456545 FAM90A26D6RGX4 464 aa13.57□□□□□ -0.24
PDLIM2-215ENST00000456545 IAPPP10997 89 aa13.57□□□□□ -0.24
PDLIM2-215ENST00000456545 RAB11AP62491 216 aa13.57□□□□□ -0.24
PDLIM2-215ENST00000456545 RPP30P78346 268 aaKnown RBP13.57□□□□□ -0.24
PDLIM2-215ENST00000456545 Q8WTZ3 238 aa13.57□□□□□ -0.24
PDLIM2-215ENST00000456545 ACY3Q96HD9 319 aa13.57□□□□□ -0.24
PDLIM2-215ENST00000456545 RCHY1Q96PM5 261 aa13.57□□□□□ -0.24
PDLIM2-215ENST00000456545 MRPL36Q9P0J6 103 aaKnown RBP13.57□□□□□ -0.24
PDLIM2-215ENST00000456545 CHEK1O14757 476 aa13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 TSPAN4O14817 238 aa13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 PLA2G10O15496 165 aa13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 PITX3O75364 302 aa13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 NPPCP23582 126 aa13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 BTCP35070 178 aa13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 RPL11P62913 178 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 DHRS2Q13268 280 aa13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 TIGITQ495A1 244 aa13.56□□□□□ -0.24
PDLIM2-215ENST00000456545 PRSS54Q6PEW0 395 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms