RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 YPEL3P61236 119 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-210ENST00000454859 SOHLH1Q5JUK2 328 aa5.43□□□□□ -1.54
ECHDC1-210ENST00000454859 FAM110DQ8TAY7 271 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-210ENST00000454859 PCNPQ8WW12 178 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-210ENST00000454859 NARS2Q96I59 477 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-210ENST00000454859 FOXC2Q99958 501 aa5.43□□□□□ -1.54
ECHDC1-210ENST00000454859 TUBA4BQ9H853 241 aa5.43□□□□□ -1.54
ECHDC1-210ENST00000454859 DNAJC4Q9NNZ3 241 aa5.43□□□□□ -1.54
ECHDC1-210ENST00000454859 FUT9Q9Y231 359 aa5.43□□□□□ -1.54
ECHDC1-210ENST00000454859 COL12A1Q99715 3063 aa5.43□□□□□ -1.54
ECHDC1-210ENST00000454859 IGLV11-55A0A075B6I3 123 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 I3L2K1 104 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 FSHBP01225 129 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 SRP19P09132 144 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 CX3CL1P78423 397 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 SSBP2P81877 361 aaPredicted RBP5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 SCGB2A2Q13296 93 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 ZNF726P1Q15940 193 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 CYB5R2Q6BCY4 276 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 SSMEM1Q8WWF3 244 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 TPSG1Q9NRR2 321 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 HIF1ANQ9NWT6 349 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.42□□□□□ -1.545e-8■■■■■ 27.8
ECHDC1-210ENST00000454859 A0A087WWC5 75 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 E7EUB6 86 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 IGF1P05019 195 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 DEFA4P12838 97 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 RAB9AP51151 201 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 MFAP4P55083 255 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 ELLP55199 621 aaPredicted RBP5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 MEF2BQ02080 365 aaPredicted RBP5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 ICAM4Q14773 271 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 TMEM86BQ8N661 226 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 ARL6IP6Q8N6S5 226 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 C5orf56Q8N8D9 126 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 ABHD5Q8WTS1 349 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 WNT10AQ9GZT5 417 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 TNFRSF19Q9NS68 423 aa5.42□□□□□ -1.54
ECHDC1-210ENST00000454859 ARHGAP32A7KAX9 2087 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 IGHV7-81A0A0B4J1V7 117 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 PSMB11A5LHX3 300 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 A6NDX4 124 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 FAM223BA6NKX1 122 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 NCBP2LA6PVI3 153 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 C8orf88P0DMB2 117 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 CNTFRP26992 372 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 OR10J1P30954 320 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 FAM122CQ6P4D5 195 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 FAM223AQ8IWN6 122 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 DYNAPQ8N1N2 210 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 FNDC4Q9H6D8 234 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 TMEM242Q9NWH2 141 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 LY96Q9Y6Y9 160 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 A0A1W2PRE2 83 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 CXorf65A6NEN9 183 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 ZFP92A6NM28 416 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 TOMM40O96008 361 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 APOC3P02656 99 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 MYOD1P15172 320 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 GNB1P62873 340 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 Q5PR19 223 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 C10orf55Q5SWW7 151 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 MIC13Q5XKP0 118 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 LCN15Q6UWW0 184 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 NECAP1Q8NC96 275 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 NPIPB3Q92617 1050 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 UHRF2Q96PU4 802 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 NIPSNAP3BQ9BS92 247 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 SLC25A33Q9BSK2 321 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 VSIRQ9H7M9 311 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 TMEM14CQ9P0S9 112 aa5.41□□□□□ -1.54
ECHDC1-210ENST00000454859 WNK2Q9Y3S1 2297 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 TRBV7-1A0A0A6YYK4 115 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 TRBV9A0A0B4J1U6 114 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 TRAV40A0A0B4J280 105 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 A1L4Q6 167 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 FCN1O00602 326 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 HYPMO75409 117 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 NDUFB8O95169 186 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 OPN1MWP04001 364 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 S100A9P06702 114 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 OPN1MW2P0DN77 364 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 OPN1MW3P0DN78 364 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 IGHV4-31P0DP07 118 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 RND2P52198 227 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 C10orf113Q5VZT2 155 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 SPNS3Q6ZMD2 512 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 CLRN3Q8NCR9 226 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 C11orf52Q96A22 123 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 MISP3Q96FF7 219 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 USMG5Q96IX5 58 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 BTF3L4Q96K17 158 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 DOK5Q9P104 306 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 GNG13Q9P2W3 67 aa5.4□□□□□ -1.54
ECHDC1-210ENST00000454859 ABCA2Q9BZC7 2435 aa5.4□□□□□ -1.55
ECHDC1-210ENST00000454859 IGKV1D-37A0A075B6S9 117 aa5.4□□□□□ -1.55
ECHDC1-210ENST00000454859 IGKV1OR2-108A0A075B7D4 117 aa5.4□□□□□ -1.55
ECHDC1-210ENST00000454859 K7EIM0 57 aa5.4□□□□□ -1.55
ECHDC1-210ENST00000454859 COX7A2P2O60397 106 aa5.4□□□□□ -1.55
ECHDC1-210ENST00000454859 OR2C1O95371 312 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms