RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TNFRSF19Q9NS68 423 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 TRAV5A0A0B4J249 113 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 SCO2A0A1W2PP80 73 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 M0R1W7 72 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 CCL19Q99731 98 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 SSX3Q99909 188 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 MRPL36Q9P0J6 103 aaKnown RBP10.95□□□□□ -0.66
CLK3-203ENST00000454830 IGLC7A0M8Q6 106 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 PDE6DO43924 150 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 GPX4P36969 197 aaPredicted RBP10.94□□□□□ -0.66
CLK3-203ENST00000454830 COMPP49747 757 aaPredicted RBP10.94□□□□□ -0.66
CLK3-203ENST00000454830 PRR20EP86478 221 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 PRR20CP86479 221 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 PRR20DP86480 221 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 PRR20BP86481 221 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 PRR20AP86496 221 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 Q8WTZ3 238 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 BIN3Q9NQY0 253 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 NBR2O15453 112 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 FXYD3Q14802 87 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 C16orf82Q7Z2V1 217 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 YTHDF2Q9Y5A9 579 aaKnown RBP10.94□□□□□ -0.66
CLK3-203ENST00000454830 B4DEV8 164 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 FSTL3O95633 263 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 SNRPEP62304 92 aaKnown RBP10.94□□□□□ -0.66
CLK3-203ENST00000454830 RPL23P62829 140 aaKnown RBP10.94□□□□□ -0.66
CLK3-203ENST00000454830 UBE2L3P68036 154 aaKnown RBP10.94□□□□□ -0.66
CLK3-203ENST00000454830 C10orf113Q5VZT2 155 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 ETFRF1Q6IPR1 90 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 OR5AU1Q8NGC0 362 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 EAF1Q96JC9 268 aaPredicted RBP10.94□□□□□ -0.66
CLK3-203ENST00000454830 DNAJC4Q9NNZ3 241 aa10.94□□□□□ -0.66
CLK3-203ENST00000454830 A1L4Q6 167 aa10.93□□□□□ -0.66
CLK3-203ENST00000454830 CLN5O75503 358 aa10.93□□□□□ -0.66
CLK3-203ENST00000454830 S100PP25815 95 aa10.93□□□□□ -0.66
CLK3-203ENST00000454830 TUBA4BQ9H853 241 aa10.93□□□□□ -0.66
CLK3-203ENST00000454830 IGHV2-5P01817 119 aa10.93□□□□□ -0.66
CLK3-203ENST00000454830 ATP5J2P56134 94 aa10.93□□□□□ -0.66
CLK3-203ENST00000454830 BPIFB3P59826 476 aa10.93□□□□□ -0.66
CLK3-203ENST00000454830 KLF17Q5JT82 389 aaPredicted RBP10.93□□□□□ -0.66
CLK3-203ENST00000454830 CXCL1P09341 107 aa10.93□□□□□ -0.66
CLK3-203ENST00000454830 SUMO1P63165 101 aaKnown RBP10.93□□□□□ -0.66
CLK3-203ENST00000454830 CCDC144NLQ6NUI1 221 aa10.93□□□□□ -0.66
CLK3-203ENST00000454830 WNT10AQ9GZT5 417 aa10.93□□□□□ -0.66
CLK3-203ENST00000454830 RPH3ALQ9UNE2 315 aa10.93□□□□□ -0.66
CLK3-203ENST00000454830 A0A1W2PPQ1 181 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 OR11H6Q8NGC7 330 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 FNDC10F2Z333 226 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 C8orf88P0DMB2 117 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 NPPCP23582 126 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 PDLIM4P50479 330 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 ELOBQ15370 118 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 OR2T10Q8NGZ9 312 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 BLNKQ8WV28 456 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 TMEM37Q8WXS4 190 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 PERPQ96FX8 193 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 F6UZH7 168 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 TMEM11P17152 192 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 LYZP61626 148 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 HABP2Q14520 560 aaPredicted RBP10.92□□□□□ -0.66
CLK3-203ENST00000454830 FAM210BQ96KR6 192 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 TMEM167BQ9NRX6 74 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 ZNF355PQ9NSJ1 428 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 PRELID1Q9Y255 219 aa10.92□□□□□ -0.66
CLK3-203ENST00000454830 A0A087WWC5 75 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 IGHV4-39P01824 125 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 PYYP10082 97 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 TCRBV4S1A1TA0A5B7 111 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 MFAP2P55001 183 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 PQLC2Q6ZP29 291 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 OR1L4Q8NGR5 311 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 FAM168AQ92567 244 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 MDFIC2A0A1B0GVS7 189 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 LY6LH3BQJ8 138 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 H3BTX0 84 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 CRYBB3P26998 211 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 MAS1LP35410 378 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 GALR1P47211 349 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 MORN5Q5VZ52 161 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 DYNAPQ8N1N2 210 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 PTPN13Q12923 2485 aa10.91□□□□□ -0.66
CLK3-203ENST00000454830 OR1P1Q8NH06 330 aa10.9□□□□□ -0.66
CLK3-203ENST00000454830 PFDN5Q99471 154 aa10.9□□□□□ -0.66
CLK3-203ENST00000454830 HOXB4P17483 251 aaPredicted RBP10.9□□□□□ -0.66
CLK3-203ENST00000454830 PMS2P11Q13670 270 aa10.9□□□□□ -0.66
CLK3-203ENST00000454830 LINC00305Q7Z4B0 112 aa10.9□□□□□ -0.66
CLK3-203ENST00000454830 NRGNQ92686 78 aa10.9□□□□□ -0.66
CLK3-203ENST00000454830 F11RQ9Y624 299 aaKnown RBP10.9□□□□□ -0.66
CLK3-203ENST00000454830 SELENOTP62341 195 aa10.9□□□□□ -0.67
CLK3-203ENST00000454830 MRGPRG-AS1Q2M3A8 158 aa10.9□□□□□ -0.67
CLK3-203ENST00000454830 RUSC1-AS1Q66K80 236 aa10.9□□□□□ -0.67
CLK3-203ENST00000454830 LEMD1Q68G75 181 aa10.9□□□□□ -0.67
CLK3-203ENST00000454830 PAXXQ9BUH6 204 aa10.9□□□□□ -0.67
CLK3-203ENST00000454830 ELOVL1Q9BW60 279 aa10.9□□□□□ -0.67
CLK3-203ENST00000454830 IGHV2-70DA0A0C4DH43 119 aa10.89□□□□□ -0.67
CLK3-203ENST00000454830 CLEC2AQ6UVW9 174 aa10.89□□□□□ -0.67
CLK3-203ENST00000454830 PCP4L1A6NKN8 68 aa10.89□□□□□ -0.67
CLK3-203ENST00000454830 CORTO00230 105 aa10.89□□□□□ -0.67
CLK3-203ENST00000454830 RNF224P0DH78 156 aa10.89□□□□□ -0.67
CLK3-203ENST00000454830 MGST1P10620 155 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms