RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 HAX1O00165 279 aa11.4□□□□□ -0.58
TNF-208ENST00000449264 DFFBO76075 338 aa11.4□□□□□ -0.58
TNF-208ENST00000449264 MDKP21741 143 aaPredicted RBP11.4□□□□□ -0.58
TNF-208ENST00000449264 ETFRF1Q6IPR1 90 aa11.4□□□□□ -0.58
TNF-208ENST00000449264 ACSM6Q6P461 480 aa11.4□□□□□ -0.58
TNF-208ENST00000449264 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.4□□□□□ -0.58
TNF-208ENST00000449264 UBAC2Q8NBM4 344 aa11.4□□□□□ -0.58
TNF-208ENST00000449264 SCARB1Q8WTV0 552 aa11.4□□□□□ -0.58
TNF-208ENST00000449264 ZNF471Q9BX82 626 aaPredicted RBP11.4□□□□□ -0.58
TNF-208ENST00000449264 SLA2Q9H6Q3 261 aa11.4□□□□□ -0.58
TNF-208ENST00000449264 MRPL36Q9P0J6 103 aaKnown RBP11.4□□□□□ -0.58
TNF-208ENST00000449264 PSMB8P28062 276 aa11.4□□□□□ -0.59
TNF-208ENST00000449264 GPX4P36969 197 aaPredicted RBP11.4□□□□□ -0.59
TNF-208ENST00000449264 RAB9AP51151 201 aa11.4□□□□□ -0.59
TNF-208ENST00000449264 RND2P52198 227 aa11.4□□□□□ -0.59
TNF-208ENST00000449264 GAMTQ14353 236 aa11.4□□□□□ -0.59
TNF-208ENST00000449264 OPCMLQ14982 345 aa11.4□□□□□ -0.59
TNF-208ENST00000449264 ATP6V1FQ16864 119 aa11.4□□□□□ -0.59
TNF-208ENST00000449264 RPL7L1Q6DKI1 246 aaKnown RBP11.4□□□□□ -0.59
TNF-208ENST00000449264 RNF114Q9Y508 228 aa11.4□□□□□ -0.59
TNF-208ENST00000449264 FAM223BA6NKX1 122 aa11.39□□□□□ -0.59
TNF-208ENST00000449264 TAAR5O14804 337 aa11.39□□□□□ -0.59
TNF-208ENST00000449264 ATP5G2Q06055 141 aa11.39□□□□□ -0.59
TNF-208ENST00000449264 FOXE3Q13461 319 aa11.39□□□□□ -0.59
TNF-208ENST00000449264 ZNF266Q14584 549 aa11.39□□□□□ -0.59
TNF-208ENST00000449264 FAM223AQ8IWN6 122 aa11.39□□□□□ -0.59
TNF-208ENST00000449264 OR5AU1Q8NGC0 362 aa11.39□□□□□ -0.59
TNF-208ENST00000449264 CACNG8Q8WXS5 425 aa11.39□□□□□ -0.59
TNF-208ENST00000449264 GGACTQ9BVM4 153 aa11.39□□□□□ -0.59
TNF-208ENST00000449264 BORCS7-ASMTA0A0B4J1R7 106 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 CLPSL1A2RUU4 121 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 IFNA5P01569 189 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 IGHV3-11P01762 117 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 RPLP1P05386 114 aaKnown RBP11.38□□□□□ -0.59
TNF-208ENST00000449264 ELANEP08246 267 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 C4BPBP20851 252 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 VWC2Q2TAL6 325 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 KLK9Q2XQG4 91 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 Q56UQ5 140 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 KHDC1LQ5JSQ8 128 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 TREML4Q6UXN2 200 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 OR4X2Q8NGF9 303 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 NPIPB3Q92617 1050 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 CYTL1Q9NRR1 136 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 C21orf62Q9NYP8 219 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 KLK9Q9UKQ9 250 aa11.38□□□□□ -0.59
TNF-208ENST00000449264 TMEM89A2RUT3 159 aa11.37□□□□□ -0.59
TNF-208ENST00000449264 BRI3O95415 125 aa11.37□□□□□ -0.59
TNF-208ENST00000449264 FGF7P21781 194 aa11.37□□□□□ -0.59
TNF-208ENST00000449264 HIST2H2BDQ6DRA6 164 aa11.37□□□□□ -0.59
TNF-208ENST00000449264 C11orf44Q8N8P7 122 aa11.37□□□□□ -0.59
TNF-208ENST00000449264 HSD17B11Q8NBQ5 300 aa11.37□□□□□ -0.59
TNF-208ENST00000449264 EEF1AKMT3Q96AZ1 226 aa11.37□□□□□ -0.59
TNF-208ENST00000449264 CXorf58Q96LI9 332 aa11.37□□□□□ -0.59
TNF-208ENST00000449264 NPVFQ9HCQ7 196 aa11.37□□□□□ -0.59
TNF-208ENST00000449264 FNDC10F2Z333 226 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 RUNX1Q01196 453 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 PRIMA1Q86XR5 153 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 COMMD1Q8N668 190 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 SCGB1C1Q8TD33 95 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 VN1R17PQ8TDU5 208 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 OR5B12Q96R08 314 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 A0A0G2JLM5 398 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 OR2T8A6NH00 312 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 ZFP92A6NM28 416 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 GNG7O60262 68 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 JTBO76095 146 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 GPR183P32249 361 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 MFAP4P55083 255 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 TEPPQ6URK8 271 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 BTNL8Q6UX41 500 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 TMEM144Q7Z5S9 345 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 TMEM116Q8NCL8 245 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 OR4X1Q8NH49 305 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 ZNF502Q8TBZ5 544 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 USMG5Q96IX5 58 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 CCDC140Q96MF4 163 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 WDR61Q9GZS3 305 aaKnown RBP11.36□□□□□ -0.59
TNF-208ENST00000449264 WDR83OSQ9Y284 106 aa11.36□□□□□ -0.59
TNF-208ENST00000449264 IGKV1OR2-108A0A075B7D4 117 aa11.35□□□□□ -0.59
TNF-208ENST00000449264 CLN5O75503 358 aa11.35□□□□□ -0.59
TNF-208ENST00000449264 OR10J1P30954 320 aa11.35□□□□□ -0.59
TNF-208ENST00000449264 NPBWR1P48145 328 aa11.35□□□□□ -0.59
TNF-208ENST00000449264 PROK1P58294 105 aa11.35□□□□□ -0.59
TNF-208ENST00000449264 CLEC19AQ6UXS0 136 aa11.35□□□□□ -0.59
TNF-208ENST00000449264 SLC51BQ86UW2 128 aa11.35□□□□□ -0.59
TNF-208ENST00000449264 WIPF2Q8TF74 440 aaPredicted RBP11.35□□□□□ -0.59
TNF-208ENST00000449264 RSG1Q9BU20 258 aa11.35□□□□□ -0.59
TNF-208ENST00000449264 TRBV7-1A0A0A6YYK4 115 aa11.34□□□□□ -0.59
TNF-208ENST00000449264 F8W735 103 aaPredicted RBP11.34□□□□□ -0.59
TNF-208ENST00000449264 CD28P10747 220 aa11.34□□□□□ -0.59
TNF-208ENST00000449264 TPT1P13693 172 aaKnown RBP11.34□□□□□ -0.59
TNF-208ENST00000449264 TCTEX1D4Q5JR98 221 aa11.34□□□□□ -0.59
TNF-208ENST00000449264 RNF152Q8N8N0 203 aa11.34□□□□□ -0.59
TNF-208ENST00000449264 MGST2Q99735 147 aa11.34□□□□□ -0.59
TNF-208ENST00000449264 NPCDR1Q9BY65 106 aa11.34□□□□□ -0.59
TNF-208ENST00000449264 GNB4Q9HAV0 340 aa11.34□□□□□ -0.59
TNF-208ENST00000449264 LSM4Q9Y4Z0 139 aaKnown RBP11.34□□□□□ -0.59
TNF-208ENST00000449264 ANKRD34BA5PLL1 514 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 PPP5D1E7EU14 171 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms