RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 VKORC1L1Q8N0U8 176 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 ZNF407Q9C0G0 2248 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 RUNX1Q01196 453 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 AKIRIN1Q9H9L7 192 aaPredicted RBP7.12□□□□□ -1.27
PTPN3-204ENST00000446349 BEX4Q9NWD9 120 aaPredicted RBP7.12□□□□□ -1.27
PTPN3-204ENST00000446349 TIMM23O14925 209 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 CNTFRP26992 372 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 CENPWQ5EE01 88 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 VMO1Q7Z5L0 202 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 CELA3BP08861 270 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 OR4D5Q8NGN0 318 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 PKIGQ9Y2B9 76 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 SP5Q6BEB4 398 aaPredicted RBP7.12□□□□□ -1.27
PTPN3-204ENST00000446349 FER1L6-AS1Q8NA97 138 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 ABCA1O95477 2261 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 IGHV1-8P0DP01 117 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 SIGLEC15Q6ZMC9 328 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 KMT2EQ8IZD2 1858 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 SLC25A48Q6ZT89 311 aaKnown RBP7.11□□□□□ -1.27
PTPN3-204ENST00000446349 NCOR1P1Q9H4R4 102 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 FNDC10F2Z333 226 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 ZNF415Q09FC8 603 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 TMEM42Q69YG0 159 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 PLXNA2O75051 1894 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 TRBV6-6A0A0A6YYG2 114 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 TRGV4A0A0C4DH28 118 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 MED19A0JLT2 244 aaPredicted RBP7.11□□□□□ -1.27
PTPN3-204ENST00000446349 PLA2G2CQ5R387 149 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 FAM89BQ8N5H3 189 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 HIST1H4GQ99525 98 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 ORMDL3Q8N138 153 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 BEND2Q8NDZ0 799 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 PARLQ9H300 379 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 A0A1W2PRE2 83 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 TDGF1P13385 188 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 SEC11AP67812 179 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 MTURNQ8N3F0 131 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 AICDAQ9GZX7 198 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 C9JCJ5 164 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 NR2C2APQ86WQ0 139 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 Q9H3A6 140 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 RPP21Q9H633 154 aaKnown RBP7.11□□□□□ -1.27
PTPN3-204ENST00000446349 ELF5Q9UKW6 265 aaPredicted RBP7.11□□□□□ -1.27
PTPN3-204ENST00000446349 OR11H12B2RN74 326 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 H0YL77 283 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 IFI27P40305 119 aaPredicted RBP7.11□□□□□ -1.27
PTPN3-204ENST00000446349 OR11H1Q8NG94 326 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 OR11H2Q8NH07 326 aa7.11□□□□□ -1.27
PTPN3-204ENST00000446349 C17orf98A8MV24 154 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 FABP2P12104 132 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 FAM219BQ5XKK7 198 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 C9orf139Q6ZV77 190 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 LINC00477Q96M19 166 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 A6NNC1 897 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 DUTP33316 252 aaKnown RBP7.1□□□□□ -1.27
PTPN3-204ENST00000446349 RNASE4P34096 147 aaKnown RBP7.1□□□□□ -1.27
PTPN3-204ENST00000446349 LCN12Q6JVE5 192 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 A0A1W2PRX2 142 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 KIR3DL3Q8N743 410 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 VCX2Q9H322 139 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 MBNL3Q9NUK0 354 aaKnown RBP7.1□□□□□ -1.27
PTPN3-204ENST00000446349 EIF3GO75821 320 aaKnown RBP eCLIP7.1□□□□□ -1.27
PTPN3-204ENST00000446349 ORMDL2Q53FV1 153 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 ZNF506Q5JVG8 444 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 LYPD1Q8N2G4 141 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 IGKV3-20P01619 116 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 MSMBP08118 114 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 ST20Q9HBF5 79 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 IL36BQ9NZH7 164 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 TRAV24A0A0B4J272 114 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 SAP30O75446 220 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 SCGB1A1P11684 91 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 NXT2Q9NPJ8 142 aaKnown RBP7.1□□□□□ -1.27
PTPN3-204ENST00000446349 PCNX1Q96RV3 2341 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 OR10J3Q5JRS4 329 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 TRGV9Q99603 122 aa7.1□□□□□ -1.27
PTPN3-204ENST00000446349 HOXA5P20719 270 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 UQCR10Q9UDW1 63 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 CACNA1GO43497 2377 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 NCKAP5O14513 1909 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 CD7P09564 240 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 KLK2P20151 261 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 JKAMPQ9P055 326 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 M0R381 172 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 CCL3L1P16619 93 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 IGFBP2P18065 325 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 DOCK10Q96BY6 2186 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 H3BVH4 76 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 PRTN3P24158 256 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 OR5AN1Q8NGI8 311 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 ZNF414Q96IQ9 312 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 C5orf64Q2M2E5 130 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 NSUN5P1Q3KNT7 163 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 OR9G4Q8NGQ1 327 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 MARVELD3Q96A59 401 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 EREGO14944 169 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 WFDC6Q9BQY6 131 aa7.09□□□□□ -1.27
PTPN3-204ENST00000446349 STAG3L3P0CL85 134 aa7.09□□□□□ -1.28
PTPN3-204ENST00000446349 FOXF2Q12947 444 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 COL5A1-AS1Q5SY13 56 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms