RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CRIPAKQ8N1N5 446 aa15.58■□□□□ 0.09
SHANK3-203ENST00000445220 DMRTA2Q96SC8 542 aa15.58■□□□□ 0.09
SHANK3-203ENST00000445220 C1QTNF5Q9BXJ0 243 aa15.58■□□□□ 0.09
SHANK3-203ENST00000445220 CLEC7AQ9BXN2 247 aa15.58■□□□□ 0.09
SHANK3-203ENST00000445220 CHCHD2Q9Y6H1 151 aaPredicted RBP15.58■□□□□ 0.09
SHANK3-203ENST00000445220 A0A0A6YYD4 124 aa15.58■□□□□ 0.08
SHANK3-203ENST00000445220 C9JCJ5 164 aa15.58■□□□□ 0.08
SHANK3-203ENST00000445220 ZNRF1Q8ND25 227 aa15.58■□□□□ 0.08
SHANK3-203ENST00000445220 C20orf144Q9BQM9 153 aa15.58■□□□□ 0.08
SHANK3-203ENST00000445220 MYOFQ9NZM1 2061 aa15.58■□□□□ 0.08
SHANK3-203ENST00000445220 LINC00271P0C7V0 271 aa15.58■□□□□ 0.08
SHANK3-203ENST00000445220 NRN1LQ496H8 165 aa15.58■□□□□ 0.08
SHANK3-203ENST00000445220 BCL6BQ8N143 479 aaPredicted RBP15.58■□□□□ 0.08
SHANK3-203ENST00000445220 LYPD3O95274 346 aa15.58■□□□□ 0.08
SHANK3-203ENST00000445220 IGKV1D-8A0A087WSZ0 117 aa15.57■□□□□ 0.08
SHANK3-203ENST00000445220 CEACAM4O75871 244 aa15.57■□□□□ 0.08
SHANK3-203ENST00000445220 ATP5G2Q06055 141 aa15.57■□□□□ 0.08
SHANK3-203ENST00000445220 SRSF1Q07955 248 aaKnown RBP eCLIP15.57■□□□□ 0.08
SHANK3-203ENST00000445220 RRN3P1Q2M238 152 aa15.57■□□□□ 0.08
SHANK3-203ENST00000445220 FAM106AQ4KMX7 169 aa15.57■□□□□ 0.08
SHANK3-203ENST00000445220 REPIN1Q9BWE0 567 aaKnown RBP15.57■□□□□ 0.08
SHANK3-203ENST00000445220 ZNF236Q9UL36 1845 aa15.57■□□□□ 0.08
SHANK3-203ENST00000445220 ZNF815PA8K554 130 aa15.57■□□□□ 0.08
SHANK3-203ENST00000445220 EEF1AKMT3Q96AZ1 226 aa15.57■□□□□ 0.08
SHANK3-203ENST00000445220 SNHG12Q9BXW3 62 aa15.57■□□□□ 0.08
SHANK3-203ENST00000445220 LCN12Q6JVE5 192 aa15.56■□□□□ 0.08
SHANK3-203ENST00000445220 PPIAL4CA0A0B4J2A2 164 aa15.56■□□□□ 0.08
SHANK3-203ENST00000445220 PPIAL4GP0DN37 164 aa15.56■□□□□ 0.08
SHANK3-203ENST00000445220 MRPL27Q9P0M9 148 aaKnown RBP15.56■□□□□ 0.08
SHANK3-203ENST00000445220 PSMB11A5LHX3 300 aa15.56■□□□□ 0.08
SHANK3-203ENST00000445220 PATJQ8NI35 1801 aa15.56■□□□□ 0.08
SHANK3-203ENST00000445220 A0A087X0K7 114 aa15.56■□□□□ 0.08
SHANK3-203ENST00000445220 FABP5P3A8MUU1 101 aa15.56■□□□□ 0.08
SHANK3-203ENST00000445220 GUSBP1Q15486 140 aa15.56■□□□□ 0.08
SHANK3-203ENST00000445220 OCIAD2Q56VL3 154 aa15.56■□□□□ 0.08
SHANK3-203ENST00000445220 RAX2Q96IS3 184 aa15.56■□□□□ 0.08
SHANK3-203ENST00000445220 TNFRSF18Q9Y5U5 241 aa15.56■□□□□ 0.08
SHANK3-203ENST00000445220 PSME4Q14997 1843 aa15.56■□□□□ 0.08
SHANK3-203ENST00000445220 KIR3DL3Q8N743 410 aa15.55■□□□□ 0.08
SHANK3-203ENST00000445220 NCOR1P1Q9H4R4 102 aa15.55■□□□□ 0.08
SHANK3-203ENST00000445220 IGHV3-35A0A0C4DH35 117 aa15.55■□□□□ 0.08
SHANK3-203ENST00000445220 C11orf68Q9H3H3 251 aaKnown RBP15.55■□□□□ 0.08
SHANK3-203ENST00000445220 C15orf61A6NNL5 157 aa15.55■□□□□ 0.08
SHANK3-203ENST00000445220 Q6ZT83 130 aa15.55■□□□□ 0.08
SHANK3-203ENST00000445220 CACNA1BQ00975 2339 aa15.55■□□□□ 0.08
SHANK3-203ENST00000445220 TRBV7-9A0A0J9YWB2 115 aa15.55■□□□□ 0.08
SHANK3-203ENST00000445220 hDV102S1A0JD36 115 aa15.55■□□□□ 0.08
SHANK3-203ENST00000445220 TM4SF5O14894 197 aa15.55■□□□□ 0.08
SHANK3-203ENST00000445220 FOXA2Q9Y261 457 aaPredicted RBP15.55■□□□□ 0.08
SHANK3-203ENST00000445220 ICE1Q9Y2F5 2266 aa15.55■□□□□ 0.08
SHANK3-203ENST00000445220 CACNA1IQ9P0X4 2223 aa15.54■□□□□ 0.08
SHANK3-203ENST00000445220 RPP25LQ8N5L8 163 aaKnown RBP15.54■□□□□ 0.08
SHANK3-203ENST00000445220 TIMP4Q99727 224 aa15.54■□□□□ 0.08
SHANK3-203ENST00000445220 SLX1AQ9BQ83 275 aa15.54■□□□□ 0.08
SHANK3-203ENST00000445220 TRAV5A0A0B4J249 113 aa15.54■□□□□ 0.08
SHANK3-203ENST00000445220 TGFBR3LH3BV60 316 aa15.54■□□□□ 0.08
SHANK3-203ENST00000445220 ORMDL2Q53FV1 153 aa15.54■□□□□ 0.08
SHANK3-203ENST00000445220 TET1Q8NFU7 2136 aa15.54■□□□□ 0.08
SHANK3-203ENST00000445220 ASCL2Q99929 193 aa15.54■□□□□ 0.08
SHANK3-203ENST00000445220 POLR3KQ9Y2Y1 108 aaPredicted RBP15.54■□□□□ 0.08
SHANK3-203ENST00000445220 CHTOPQ9Y3Y2 248 aaKnown RBP15.54■□□□□ 0.08
SHANK3-203ENST00000445220 LY96Q9Y6Y9 160 aa15.54■□□□□ 0.08
SHANK3-203ENST00000445220 PYYP10082 97 aa15.54■□□□□ 0.08
SHANK3-203ENST00000445220 CST9LQ9H4G1 147 aa15.54■□□□□ 0.08
SHANK3-203ENST00000445220 TDRD6O60522 2096 aaKnown RBP15.54■□□□□ 0.08
SHANK3-203ENST00000445220 A0A0G2JMM0 328 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 A0A1W2PPB8 328 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 KIR3DP1A8MWS1 328 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 UPK2O00526 184 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 LYL1P12980 280 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 ANKRD36A6QL64 1941 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 IGLV3-12A0A075B6K2 115 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 KIR3DS1Q14943 382 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 JMJD8Q96S16 334 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 YAE1D1Q9NRH1 226 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 SVILO95425 2214 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 ITGB1BP1O14713 200 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 FAM90A9PA6NNJ1 464 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 SLC25A48Q6ZT89 311 aaKnown RBP15.53■□□□□ 0.08
SHANK3-203ENST00000445220 ERG28Q9UKR5 140 aa15.53■□□□□ 0.08
SHANK3-203ENST00000445220 PLNP26678 52 aa15.52■□□□□ 0.08
SHANK3-203ENST00000445220 SRSF6Q13247 344 aaKnown RBP15.52■□□□□ 0.08
SHANK3-203ENST00000445220 MRPS18CQ9Y3D5 142 aaKnown RBP15.52■□□□□ 0.08
SHANK3-203ENST00000445220 SSBP2P81877 361 aaPredicted RBP15.52■□□□□ 0.08
SHANK3-203ENST00000445220 PSG8Q9UQ74 426 aa15.52■□□□□ 0.08
SHANK3-203ENST00000445220 TRAV12-3A0A0B4J271 114 aa15.52■□□□□ 0.07
SHANK3-203ENST00000445220 CD33P20138 364 aa15.52■□□□□ 0.07
SHANK3-203ENST00000445220 SELENOKQ9Y6D0 94 aa15.52■□□□□ 0.07
SHANK3-203ENST00000445220 SYS1-DBNDD2H3BUS1 97 aa15.52■□□□□ 0.07
SHANK3-203ENST00000445220 RAMP3O60896 148 aa15.52■□□□□ 0.07
SHANK3-203ENST00000445220 CNTFRP26992 372 aa15.52■□□□□ 0.07
SHANK3-203ENST00000445220 SNRPD3P62318 126 aaKnown RBP15.52■□□□□ 0.07
SHANK3-203ENST00000445220 IGHV3OR16-13A0A075B7E8 117 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 IGHV3-74A0A0B4J1X5 117 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 IGKV3OR2-268A0A0C4DH90 116 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 RBMY1BA6NDE4 496 aaKnown RBP15.51■□□□□ 0.07
SHANK3-203ENST00000445220 RBMY1EA6NEQ0 496 aaKnown RBP15.51■□□□□ 0.07
SHANK3-203ENST00000445220 RBMY1DP0C7P1 496 aaKnown RBP15.51■□□□□ 0.07
SHANK3-203ENST00000445220 RBMY1A1P0DJD3 496 aaKnown RBP15.51■□□□□ 0.07
SHANK3-203ENST00000445220 RBMY1CP0DJD4 496 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms