RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 PACRGLQ8N7B6 248 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 CBLN4Q9NTU7 201 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 SLC39A9Q9NUM3 307 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 C21orf62Q9NYP8 219 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 IL36BQ9NZH7 164 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 ZNF609O15014 1411 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 MYH10P35580 1976 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 TRBV7-6A0A0J9YX20 115 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 A0A1B0GVG6 124 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 ZNF860A6NHJ4 632 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 TMEM212A6NML5 194 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 NPFFO15130 113 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 RBFOX2O43251 390 aaKnown RBP eCLIP3.07□□□□□ -1.92
VPS50-206ENST00000443443 NAPSAO96009 420 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 GNG4P50150 75 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 RAB5CP51148 216 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 RELAQ04206 551 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 ZNF678Q5SXM1 525 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 TMEM14EPQ6UXP3 125 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 CEND1Q8N111 149 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 RPP25LQ8N5L8 163 aaKnown RBP3.07□□□□□ -1.92
VPS50-206ENST00000443443 OR5A2Q8NGI9 324 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 LINC01006Q8NI28 216 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 ITLN2Q8WWU7 325 aaPredicted RBP3.07□□□□□ -1.92
VPS50-206ENST00000443443 HIST1H2BAQ96A08 127 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 MGLLQ99685 303 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 B9D2Q9BPU9 175 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 DERL1Q9BUN8 251 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 PLA2G12AQ9BZM1 189 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 FAIMQ9NVQ4 179 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 SCN3BQ9NY72 215 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 SNX12Q9UMY4 172 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 KLK5Q9Y337 293 aaPredicted RBP3.07□□□□□ -1.92
VPS50-206ENST00000443443 PHLDA3Q9Y5J5 127 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 PRG4Q92954 1404 aaPredicted RBP3.07□□□□□ -1.92
VPS50-206ENST00000443443 DOCK5Q9H7D0 1870 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 MIA3Q5JRA6 1907 aa3.07□□□□□ -1.92
VPS50-206ENST00000443443 IGHV1-58A0A0C4DH39 117 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 ODAMA1E959 279 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 TMEM218A2RU14 115 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 BBIP1A8MTZ0 92 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 M0R378 163 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 ARHGEF11O15085 1522 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 PGLYRP1O75594 196 aaPredicted RBP3.06□□□□□ -1.92
VPS50-206ENST00000443443 SNAPC5O75971 98 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 AKAIN1P0CW23 69 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 CSRP1P21291 193 aaKnown RBP3.06□□□□□ -1.92
VPS50-206ENST00000443443 RPL27AP46776 148 aaKnown RBP3.06□□□□□ -1.92
VPS50-206ENST00000443443 HIST1H4AP62805 103 aaKnown RBP3.06□□□□□ -1.92
VPS50-206ENST00000443443 UBE2BP63146 152 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 HES1Q14469 280 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 ZNF181Q2M3W8 571 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.06□□□□□ -1.92
VPS50-206ENST00000443443 CHD5Q8TDI0 1954 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 DCANP1Q8TF63 244 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 BRK1Q8WUW1 75 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 RNASE6Q93091 150 aaKnown RBP3.06□□□□□ -1.92
VPS50-206ENST00000443443 ZNF799Q96GE5 643 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 YPEL2Q96QA6 119 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 NRTNQ99748 197 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 ADAT1Q9BUB4 502 aaKnown RBP3.06□□□□□ -1.92
VPS50-206ENST00000443443 GABARAPL1Q9H0R8 117 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 MARCOQ9UEW3 520 aaPredicted RBP3.06□□□□□ -1.92
VPS50-206ENST00000443443 SCN10AQ9Y5Y9 1956 aa3.06□□□□□ -1.92
VPS50-206ENST00000443443 CEP170Q5SW79 1584 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 GPATCH8Q9UKJ3 1502 aaKnown RBP3.05□□□□□ -1.92
VPS50-206ENST00000443443 TCOF1Q13428 1488 aaKnown RBP3.05□□□□□ -1.92
VPS50-206ENST00000443443 TRAPPC8Q9Y2L5 1435 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 TMEM2Q9UHN6 1383 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 TRAV13-1A0A0B4J241 112 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 IGHV1-3A0A0C4DH29 117 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 ZNF670-ZNF695F2Z2N8 137 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 LY6LH3BQJ8 138 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 BUB1B-PAK6H3BSN5 160 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 TMEM256-PLSCR3K7ERE1 68 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 HRASP01112 189 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 KRASP01116 189 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 OR5AC1P0C628 307 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 TLX1NBP0CAT3 122 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 CD28P10747 220 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 NPPCP23582 126 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 RPL22P35268 128 aaKnown RBP3.05□□□□□ -1.92
VPS50-206ENST00000443443 MRPL51Q4U2R6 128 aaKnown RBP3.05□□□□□ -1.92
VPS50-206ENST00000443443 SPANXN3Q5MJ09 141 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 LDLRAD2Q5SZI1 272 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 FAM104BQ5XKR9 115 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 IGFL3Q6UXB1 125 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 GTF2H5Q6ZYL4 71 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 Q8N976 141 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 OR8D4Q8NGM9 314 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 STAG3L4Q8TBR4 150 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 DEDD2Q8WXF8 326 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 TMEM191AQ9H0A3 160 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 BANF2Q9H503 90 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 RERGLQ9H628 205 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 XAGE1AQ9HD64 81 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 ZNF586Q9NXT0 402 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 ZNRD1Q9P1U0 126 aa3.05□□□□□ -1.92
VPS50-206ENST00000443443 GRIN2AQ12879 1464 aa3.04□□□□□ -1.92
VPS50-206ENST00000443443 CECR2Q9BXF3 1484 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms