RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 RELQ04864 619 aaPredicted RBP16.59■□□□□ 0.25
HDLBP-220ENST00000442730 LINC00322Q6ZN03 302 aaPredicted RBP16.59■□□□□ 0.25
HDLBP-220ENST00000442730 SLC16A13Q7RTY0 426 aa16.59■□□□□ 0.25
HDLBP-220ENST00000442730 GPR146Q96CH1 333 aa16.59■□□□□ 0.25
HDLBP-220ENST00000442730 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.59■□□□□ 0.25
HDLBP-220ENST00000442730 CACNG5Q9UF02 275 aa16.59■□□□□ 0.25
HDLBP-220ENST00000442730 C15orf62A8K5M9 175 aa16.58■□□□□ 0.24
HDLBP-220ENST00000442730 OR11H12B2RN74 326 aa16.58■□□□□ 0.24
HDLBP-220ENST00000442730 K7EMT4 169 aa16.58■□□□□ 0.24
HDLBP-220ENST00000442730 PLA2G10O15496 165 aa16.58■□□□□ 0.24
HDLBP-220ENST00000442730 SPCS3P61009 180 aa16.58■□□□□ 0.24
HDLBP-220ENST00000442730 BSXQ3C1V8 233 aa16.58■□□□□ 0.24
HDLBP-220ENST00000442730 OR52B4Q8NGK2 314 aa16.58■□□□□ 0.24
HDLBP-220ENST00000442730 OR52E5Q8NH55 327 aa16.58■□□□□ 0.24
HDLBP-220ENST00000442730 ENY2Q9NPA8 101 aa16.58■□□□□ 0.24
HDLBP-220ENST00000442730 ZNF207O43670 478 aaKnown RBP16.57■□□□□ 0.24
HDLBP-220ENST00000442730 PPP1R1AQ13522 171 aa16.57■□□□□ 0.24
HDLBP-220ENST00000442730 RBPMS2Q6ZRY4 209 aaKnown RBP16.57■□□□□ 0.24
HDLBP-220ENST00000442730 LGI3Q8N145 548 aa16.57■□□□□ 0.24
HDLBP-220ENST00000442730 SPATA25Q9BR10 227 aa16.57■□□□□ 0.24
HDLBP-220ENST00000442730 SRD5A3Q9H8P0 318 aa16.57■□□□□ 0.24
HDLBP-220ENST00000442730 RBMY1BA6NDE4 496 aaKnown RBP16.56■□□□□ 0.24
HDLBP-220ENST00000442730 RBMY1EA6NEQ0 496 aaKnown RBP16.56■□□□□ 0.24
HDLBP-220ENST00000442730 CORTO00230 105 aa16.56■□□□□ 0.24
HDLBP-220ENST00000442730 GNG7O60262 68 aa16.56■□□□□ 0.24
HDLBP-220ENST00000442730 RBMY1DP0C7P1 496 aaKnown RBP16.56■□□□□ 0.24
HDLBP-220ENST00000442730 SUB1P53999 127 aaKnown RBP eCLIP16.56■□□□□ 0.24
HDLBP-220ENST00000442730 UBE2MP61081 183 aaKnown RBP16.56■□□□□ 0.24
HDLBP-220ENST00000442730 OR10C1Q96KK4 312 aa16.56■□□□□ 0.24
HDLBP-220ENST00000442730 FLVCR2Q9UPI3 526 aa16.56■□□□□ 0.24
HDLBP-220ENST00000442730 A0A0B4J2A0 478 aa16.55■□□□□ 0.24
HDLBP-220ENST00000442730 SFT2D2O95562 160 aa16.55■□□□□ 0.24
HDLBP-220ENST00000442730 ANKRD55Q3KP44 614 aa16.55■□□□□ 0.24
HDLBP-220ENST00000442730 DUSP18Q8NEJ0 188 aa16.55■□□□□ 0.24
HDLBP-220ENST00000442730 SPAG8Q99932 426 aaPredicted RBP16.55■□□□□ 0.24
HDLBP-220ENST00000442730 C20orf85Q9H1P6 137 aa16.55■□□□□ 0.24
HDLBP-220ENST00000442730 SHPKQ9UHJ6 478 aa16.55■□□□□ 0.24
HDLBP-220ENST00000442730 PIGBOS1A0A0B4J2F0 54 aa16.54■□□□□ 0.24
HDLBP-220ENST00000442730 TSPAN4O14817 238 aa16.54■□□□□ 0.24
HDLBP-220ENST00000442730 UPK1BO75841 260 aa16.54■□□□□ 0.24
HDLBP-220ENST00000442730 YIF1AO95070 293 aa16.54■□□□□ 0.24
HDLBP-220ENST00000442730 NPBWR1P48145 328 aa16.54■□□□□ 0.24
HDLBP-220ENST00000442730 CITED4Q96RK1 184 aa16.54■□□□□ 0.24
HDLBP-220ENST00000442730 FNDC4Q9H6D8 234 aaPredicted RBP16.54■□□□□ 0.24
HDLBP-220ENST00000442730 SMPXQ9UHP9 88 aa16.54■□□□□ 0.24
HDLBP-220ENST00000442730 TBC1D24Q9ULP9 559 aa16.54■□□□□ 0.24
HDLBP-220ENST00000442730 IGHV7-4-1A0A0J9YVY3 117 aa16.53■□□□□ 0.24
HDLBP-220ENST00000442730 NMSQ5H8A3 153 aa16.53■□□□□ 0.24
HDLBP-220ENST00000442730 LYZL2Q7Z4W2 148 aa16.53■□□□□ 0.24
HDLBP-220ENST00000442730 MRPL36Q9P0J6 103 aaKnown RBP16.53■□□□□ 0.24
HDLBP-220ENST00000442730 DUXBA0A1W2PPF3 345 aa16.52■□□□□ 0.24
HDLBP-220ENST00000442730 SULT1A3P0DMM9 295 aa16.52■□□□□ 0.24
HDLBP-220ENST00000442730 SULT1A4P0DMN0 295 aa16.52■□□□□ 0.24
HDLBP-220ENST00000442730 ANXA7P20073 488 aaKnown RBP16.52■□□□□ 0.24
HDLBP-220ENST00000442730 OPRK1P41145 380 aa16.52■□□□□ 0.24
HDLBP-220ENST00000442730 HTR2BP41595 481 aa16.52■□□□□ 0.24
HDLBP-220ENST00000442730 ASAH1Q13510 395 aa16.52■□□□□ 0.24
HDLBP-220ENST00000442730 TMEM116Q8NCL8 245 aa16.52■□□□□ 0.24
HDLBP-220ENST00000442730 MUC7Q8TAX7 377 aa16.52■□□□□ 0.24
HDLBP-220ENST00000442730 RETNQ9HD89 108 aa16.52■□□□□ 0.24
HDLBP-220ENST00000442730 HEYLQ9NQ87 328 aaPredicted RBP16.52■□□□□ 0.24
HDLBP-220ENST00000442730 CEBPZOSA8MTT3 80 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 C3orf84H3BNL1 204 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 CHEK1O14757 476 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 NXPH3O95157 252 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 LAMTOR1Q6IAA8 161 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 MZT2BQ6NZ67 158 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 TOMM20LQ6UXN7 152 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 LRTM2Q8N967 370 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 SLC24A4Q8NFF2 622 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 RNF2Q99496 336 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 RHPN1-AS1Q9BWJ2 59 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 HIPK2Q9H2X6 1198 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 ZFAND3Q9H8U3 227 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 EDA2RQ9HAV5 297 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 NUDT15Q9NV35 164 aa16.51■□□□□ 0.23
HDLBP-220ENST00000442730 IGHV3-49A0A0A0MS15 119 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 C9orf170A2RU37 121 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 TMEM50AO95807 157 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 OR4E1P0C645 316 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 DHRS2Q13268 280 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 SMCO1Q147U7 214 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 C4orf46Q504U0 113 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 C2orf83Q53S99 150 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 ZNF600Q6ZNG1 722 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 LYG2Q86SG7 212 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 OR4X1Q8NH49 305 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 TMEM170AQ8WVE7 144 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 CACFD1Q9UGQ2 172 aa16.5■□□□□ 0.23
HDLBP-220ENST00000442730 PUS1Q9Y606 427 aaKnown RBP eCLIP16.5■□□□□ 0.23
HDLBP-220ENST00000442730 TRAV14DV4A0A0A6YYC5 116 aa16.49■□□□□ 0.23
HDLBP-220ENST00000442730 CLN5O75503 358 aa16.49■□□□□ 0.23
HDLBP-220ENST00000442730 TCRBP04435 133 aa16.49■□□□□ 0.23
HDLBP-220ENST00000442730 TNFRSF9Q07011 255 aa16.49■□□□□ 0.23
HDLBP-220ENST00000442730 MLANAQ16655 118 aa16.49■□□□□ 0.23
HDLBP-220ENST00000442730 ODF3L2Q3SX64 289 aa16.49■□□□□ 0.23
HDLBP-220ENST00000442730 HSPB7Q9UBY9 170 aa16.49■□□□□ 0.23
HDLBP-220ENST00000442730 TRAV6A0A075B6T7 132 aa16.48■□□□□ 0.23
HDLBP-220ENST00000442730 A0A1B0GU03 582 aa16.48■□□□□ 0.23
HDLBP-220ENST00000442730 FAM240BA0A1B0GVZ2 78 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms