RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 MBD2Q9UBB5 411 aa3.9□□□□□ -1.79
CCDC140-202ENST00000440903 FBXL7Q9UJT9 491 aa3.9□□□□□ -1.79
CCDC140-202ENST00000440903 FBXO7Q9Y3I1 522 aa3.9□□□□□ -1.79
CCDC140-202ENST00000440903 TSSC4Q9Y5U2 329 aaPredicted RBP3.9□□□□□ -1.79
CCDC140-202ENST00000440903 ZFHX3Q15911 3703 aa3.9□□□□□ -1.79
CCDC140-202ENST00000440903 IGLV11-55A0A075B6I3 123 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 TRAV30A0A087WSZ9 112 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 TRBV7-1A0A0A6YYK4 115 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 H3BS24 57 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 NUPL2O15504 423 aaKnown RBP3.89□□□□□ -1.79
CCDC140-202ENST00000440903 DFFBO76075 338 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 MT-CO2P00403 227 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 LGALS1P09382 135 aaKnown RBP3.89□□□□□ -1.79
CCDC140-202ENST00000440903 RNASE2P10153 161 aaKnown RBP3.89□□□□□ -1.79
CCDC140-202ENST00000440903 CXCL3P19876 107 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 ZP3P21754 424 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 PSMB8P28062 276 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 PPIFP30405 207 aaKnown RBP3.89□□□□□ -1.79
CCDC140-202ENST00000440903 BMI1P35226 326 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 SULT1A1P50225 295 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 RAB9AP51151 201 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 AP2S1P53680 142 aaPredicted RBP3.89□□□□□ -1.79
CCDC140-202ENST00000440903 MFAP4P55083 255 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 H2BFSP57053 126 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 PROK1P58294 105 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 EIF5AP63241 154 aaKnown RBP3.89□□□□□ -1.79
CCDC140-202ENST00000440903 SSBP2P81877 361 aaPredicted RBP3.89□□□□□ -1.79
CCDC140-202ENST00000440903 CFHR3Q02985 330 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 SRSF4Q08170 494 aaKnown RBP3.89□□□□□ -1.79
CCDC140-202ENST00000440903 RAB31Q13636 194 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 ZNF266Q14584 549 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 ATP6V1FQ16864 119 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 C15orf32Q32M92 178 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 ZFP69Q49AA0 526 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 ASPHD1Q5U4P2 390 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 OR8G2PQ6IF36 304 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 C11orf87Q6NUJ2 197 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 S100A7AQ86SG5 101 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 NDUFA11Q86Y39 141 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 OR4F17Q8NGA8 305 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 OR1S2Q8NGQ3 325 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 C4orf3Q8WVX3 66 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 CACNG8Q8WXS5 425 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 NARS2Q96I59 477 aaKnown RBP3.89□□□□□ -1.79
CCDC140-202ENST00000440903 UBE2E2Q96LR5 201 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 OR4F4Q96R69 305 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 ATP6V0BQ99437 205 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 TXN2Q99757 166 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 TMEM147Q9BVK8 224 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 GGACTQ9BVM4 153 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 C21orf62Q9NYP8 219 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 PFDN2Q9UHV9 154 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 VPS13CQ709C8 3753 aa3.89□□□□□ -1.79
CCDC140-202ENST00000440903 ANK3Q12955 4377 aaKnown RBP3.88□□□□□ -1.79
CCDC140-202ENST00000440903 KANTRA0A1W2PQU2 76 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 A0A1W2PRX2 142 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 CGB1A6NKQ9 187 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 ZFP92A6NM28 416 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 LINC01548A6NM66 108 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 C17orf112F2Z3M2 114 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 ARPC5O15511 151 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 IFNA5P01569 189 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 IGHV3-11P01762 117 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 PRH1P02810 166 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 METTL15P1P0C7V9 234 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 EGR2P11161 476 aaPredicted RBP3.88□□□□□ -1.79
CCDC140-202ENST00000440903 RPL12P30050 165 aaKnown RBP3.88□□□□□ -1.79
CCDC140-202ENST00000440903 S100A11P31949 105 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 GPR183P32249 361 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 ARL3P36405 182 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 GPX4P36969 197 aaPredicted RBP3.88□□□□□ -1.79
CCDC140-202ENST00000440903 CDX1P47902 265 aaPredicted RBP3.88□□□□□ -1.79
CCDC140-202ENST00000440903 RND2P52198 227 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 KRTAP10-2P60368 255 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 DLK1P80370 383 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 EWSR1Q01844 656 aaKnown RBP eCLIP3.88□□□□□ -1.79
CCDC140-202ENST00000440903 RELQ04864 619 aaPredicted RBP3.88□□□□□ -1.79
CCDC140-202ENST00000440903 CD69Q07108 199 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 SLC38A11Q08AI6 406 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 MRGPRG-AS1Q2M3A8 158 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 RPEL1Q2QD12 228 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 BSXQ3C1V8 233 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 C19orf54Q5BKX5 351 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 SPSB3Q6PJ21 355 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 ACOT7LQ6ZUV0 252 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 ZNF546Q86UE3 836 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 PRIMA1Q86XR5 153 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 TCTE3Q8IZS6 198 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 TMEM252Q8N6L7 170 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 TMEM217Q8N7C4 229 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 RNF152Q8N8N0 203 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 C11orf44Q8N8P7 122 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 ZNF709Q8N972 641 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 CHAC2Q8WUX2 184 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 BSCL2Q96G97 398 aaPredicted RBP3.88□□□□□ -1.79
CCDC140-202ENST00000440903 ACY3Q96HD9 319 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 OR4C12Q96R67 309 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 GINS3Q9BRX5 216 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 ZNF747Q9BV97 191 aa3.88□□□□□ -1.79
CCDC140-202ENST00000440903 RANGRFQ9HD47 186 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms