RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 GATA2P23769 480 aaPredicted RBP15.03■□□□□ -0
SNX17-203ENST00000440760 OR10J1P30954 320 aa15.03■□□□□ -0
SNX17-203ENST00000440760 ANK3Q12955 4377 aaKnown RBP15.02■□□□□ -0
SNX17-203ENST00000440760 NPIPB5A8MRT5 1133 aa15.02■□□□□ -0
SNX17-203ENST00000440760 G3V318 75 aa15.02■□□□□ -0
SNX17-203ENST00000440760 YIF1AO95070 293 aa15.02■□□□□ -0
SNX17-203ENST00000440760 CRYGCP07315 174 aa15.02■□□□□ -0
SNX17-203ENST00000440760 SPNS3Q6ZMD2 512 aa15.02■□□□□ -0
SNX17-203ENST00000440760 RPP25LQ8N5L8 163 aaKnown RBP15.02■□□□□ -0
SNX17-203ENST00000440760 STPG3Q8N7X2 389 aa15.02■□□□□ -0
SNX17-203ENST00000440760 SGMS2Q8NHU3 365 aa15.02■□□□□ -0
SNX17-203ENST00000440760 RCC1LQ96I51 464 aaKnown RBP15.02■□□□□ -0
SNX17-203ENST00000440760 TMUB1Q9BVT8 246 aa15.02■□□□□ -0
SNX17-203ENST00000440760 SLC25A22Q9H936 323 aa15.02■□□□□ -0
SNX17-203ENST00000440760 S4R3C0 116 aa15.02■□□□□ -0
SNX17-203ENST00000440760 HMGB3O15347 200 aaKnown RBP15.02□□□□□ -0.01
SNX17-203ENST00000440760 UNQ5815/PRO19632Q6UWF5 114 aa15.02□□□□□ -0.01
SNX17-203ENST00000440760 C9orf139Q6ZV77 190 aa15.02□□□□□ -0.01
SNX17-203ENST00000440760 TTC9CQ8N5M4 171 aa15.02□□□□□ -0.01
SNX17-203ENST00000440760 LYPD6BQ8NI32 183 aa15.02□□□□□ -0.01
SNX17-203ENST00000440760 LINC00527Q9UJ94 153 aa15.02□□□□□ -0.01
SNX17-203ENST00000440760 I3L2K1 104 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 CORTO00230 105 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 TSPAN15O95858 294 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 H2AFB1P0C5Y9 115 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 IER3P46695 156 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 B2MP61769 119 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 SRSF3P84103 164 aaKnown RBP15.01□□□□□ -0.01
SNX17-203ENST00000440760 FAM122CQ6P4D5 195 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 SPSB3Q6PJ21 355 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 LCN15Q6UWW0 184 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 BPIFCQ8NFQ6 507 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 OR10G4Q8NGN3 311 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 OR10G9Q8NGN4 311 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 OR10G7Q8NGN6 311 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 SFT2D1Q8WV19 159 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 FANCD2OSQ96PS1 177 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 GSX1Q9H4S2 264 aaPredicted RBP15.01□□□□□ -0.01
SNX17-203ENST00000440760 PITPNC1Q9UKF7 332 aa15.01□□□□□ -0.01
SNX17-203ENST00000440760 OTOGQ6ZRI0 2925 aa15□□□□□ -0.01
SNX17-203ENST00000440760 IGKV1D-37A0A075B6S9 117 aa15□□□□□ -0.01
SNX17-203ENST00000440760 K7EIM0 57 aa15□□□□□ -0.01
SNX17-203ENST00000440760 SCO1O75880 301 aa15□□□□□ -0.01
SNX17-203ENST00000440760 ZP3P21754 424 aa15□□□□□ -0.01
SNX17-203ENST00000440760 FGF8P55075 233 aaPredicted RBP15□□□□□ -0.01
SNX17-203ENST00000440760 BLCAPP62952 87 aa15□□□□□ -0.01
SNX17-203ENST00000440760 CCL20P78556 96 aa15□□□□□ -0.01
SNX17-203ENST00000440760 DPPA3Q6W0C5 159 aa15□□□□□ -0.01
SNX17-203ENST00000440760 Q6ZS46 218 aa15□□□□□ -0.01
SNX17-203ENST00000440760 MARC2Q969Z3 335 aa15□□□□□ -0.01
SNX17-203ENST00000440760 TMEM231Q9H6L2 316 aa15□□□□□ -0.01
SNX17-203ENST00000440760 IGLV11-55A0A075B6I3 123 aa15□□□□□ -0.01
SNX17-203ENST00000440760 ZNF90Q03938 601 aa15□□□□□ -0.01
SNX17-203ENST00000440760 RAB31Q13636 194 aa15□□□□□ -0.01
SNX17-203ENST00000440760 SLC45A2Q9UMX9 530 aa15□□□□□ -0.01
SNX17-203ENST00000440760 PRELID1Q9Y255 219 aa15□□□□□ -0.01
SNX17-203ENST00000440760 ETFRF1Q6IPR1 90 aa14.99□□□□□ -0.01
SNX17-203ENST00000440760 SLC39A9Q9NUM3 307 aa14.99□□□□□ -0.01
SNX17-203ENST00000440760 ZFP92A6NM28 416 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 LINC00869P0C866 280 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 RPL29P47914 159 aaKnown RBP14.98□□□□□ -0.01
SNX17-203ENST00000440760 PRR20EP86478 221 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 PRR20CP86479 221 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 PRR20DP86480 221 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 PRR20BP86481 221 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 PRR20AP86496 221 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 ACOT6Q3I5F7 207 aaPredicted RBP14.98□□□□□ -0.01
SNX17-203ENST00000440760 IL34Q6ZMJ4 242 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 THAP8Q8NA92 274 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 CD5LO43866 347 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 OR2J3O76001 311 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 Q6YL49 198 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 CYP2G1PQ6ZSU1 146 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 FAM110DQ8TAY7 271 aaPredicted RBP14.98□□□□□ -0.01
SNX17-203ENST00000440760 YAE1D1Q9NRH1 226 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 KCNIP2Q9NS61 270 aa14.98□□□□□ -0.01
SNX17-203ENST00000440760 MAP1LC3B2A6NCE7 125 aa14.97□□□□□ -0.01
SNX17-203ENST00000440760 HOXA3O43365 443 aaPredicted RBP14.97□□□□□ -0.01
SNX17-203ENST00000440760 MBP02144 154 aa14.97□□□□□ -0.01
SNX17-203ENST00000440760 TMEM116Q8NCL8 245 aa14.97□□□□□ -0.01
SNX17-203ENST00000440760 MAP1LC3BQ9GZQ8 125 aa14.97□□□□□ -0.01
SNX17-203ENST00000440760 KRBOX1C9JBD0 128 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 SOX15O60248 233 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 OR1L6Q8NGR2 347 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 NOL4LQ96MY1 436 aaPredicted RBP14.96□□□□□ -0.01
SNX17-203ENST00000440760 DUX5Q96PT3 197 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 SMR3AQ99954 134 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 TCRBV4S1A1TA0A5B7 111 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 M0QZK8 103 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 NDUFB8O95169 186 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 IGHV3-23P01764 117 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 CDC34P49427 236 aaPredicted RBP14.96□□□□□ -0.01
SNX17-203ENST00000440760 SPATA31B1PQ5VZV4 182 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 C16orf82Q7Z2V1 217 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 SLC35E3Q7Z769 313 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 EIF4E3Q8N5X7 224 aaKnown RBP14.96□□□□□ -0.01
SNX17-203ENST00000440760 SIGLECL1Q8N7X8 197 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 RAB24Q969Q5 203 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 ZNF355PQ9NSJ1 428 aa14.96□□□□□ -0.01
SNX17-203ENST00000440760 VPREB3Q9UKI3 123 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms