RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 COMMD3Q9UBI1 195 aa5.03□□□□□ -1.6
ERCC8-203ENST00000439176 PLA2G2DQ9UNK4 145 aa5.03□□□□□ -1.6
ERCC8-203ENST00000439176 HYDINQ4G0P3 5121 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 IGKV3-7A0A075B6H7 116 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 A0A1W2PS18 150 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 I3L2K1 104 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 ST8SIA3O43173 380 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 DFFBO76075 338 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 TNFAIP8O95379 198 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 IFNA17P01571 189 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 AKR1C2P52895 323 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 TCF24Q7RTU0 167 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 SNX29P2Q8IUI4 249 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 LYSMD2Q8IV50 215 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 APRG1Q8IVJ8 170 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 SLC35G3Q8N808 338 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 RNASE11Q8TAA1 199 aaKnown RBP5.02□□□□□ -1.61
ERCC8-203ENST00000439176 GPX8Q8TED1 209 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 C15orf40Q8WUR7 153 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 PHLDA1Q8WV24 401 aaPredicted RBP5.02□□□□□ -1.61
ERCC8-203ENST00000439176 AP3S1Q92572 193 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 MRGPRFQ96AM1 343 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 RRNAD1Q96FB5 475 aaKnown RBP5.02□□□□□ -1.61
ERCC8-203ENST00000439176 ZNF486Q96H40 463 aaPredicted RBP5.02□□□□□ -1.61
ERCC8-203ENST00000439176 SEC22AQ96IW7 307 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 FXYD6Q9H0Q3 95 aa5.02□□□□□ -1.61
ERCC8-203ENST00000439176 IGHV3-49A0A0A0MS15 119 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 FAM25AB3EWG3 89 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 FAM25CB3EWG5 89 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 FAM25GB3EWG6 89 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 B3GALNT1O75752 331 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 PI3P19957 117 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 TBPP20226 339 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 NPPCP23582 126 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 TGFBR1P36897 503 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 EIF2B2P49770 351 aaKnown RBP5.01□□□□□ -1.61
ERCC8-203ENST00000439176 RORCP51449 518 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 PIGPP57054 158 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 TMEM187Q14656 261 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 PLECQ15149 4684 aaKnown RBP5.01□□□□□ -1.61
ERCC8-203ENST00000439176 RBMS2Q15434 407 aaKnown RBP5.01□□□□□ -1.61
ERCC8-203ENST00000439176 TRIM16LQ309B1 348 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 TMEM41BQ5BJD5 291 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 RNASE10Q5GAN6 216 aaKnown RBP5.01□□□□□ -1.61
ERCC8-203ENST00000439176 ZNF600Q6ZNG1 722 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 STHQ8IWL8 128 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 GBGT1Q8N5D6 347 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 CCDC71LQ8N9Z2 235 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 OR11H2Q8NH07 326 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 C11orf45Q8TAV5 145 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 ZFAND1Q8TCF1 268 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 YIPF6Q96EC8 236 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 GRAMD2BQ96HH9 432 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 METTL26Q96S19 204 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 COPZ2Q9P299 210 aa5.01□□□□□ -1.61
ERCC8-203ENST00000439176 IGHV3OR16-13A0A075B7E8 117 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 TRAV30A0A087WSZ9 112 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 IGHV3-74A0A0B4J1X5 117 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 TRAV2A0A0B4J234 112 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 RPS10-NUDT3A0A1W2PQS6 291 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 INS-IGF2F8WCM5 200 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 CA1P00915 261 aaPredicted RBP5□□□□□ -1.61
ERCC8-203ENST00000439176 IGHV3-48P01763 117 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 OPRK1P41145 380 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 HOXA1P49639 335 aaPredicted RBP5□□□□□ -1.61
ERCC8-203ENST00000439176 TCTAP57738 103 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 RND3P61587 244 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 LGALS9CQ6DKI2 356 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 TOMM20LQ6UXN7 152 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 ARRDC1Q8N5I2 433 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 TMEM230Q96A57 120 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 MS4A6AQ9H2W1 248 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 C11orf68Q9H3H3 251 aaKnown RBP5□□□□□ -1.61
ERCC8-203ENST00000439176 VSIRQ9H7M9 311 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 FBXL17Q9UF56 701 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 CACFD1Q9UGQ2 172 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 RABAC1Q9UI14 185 aa5□□□□□ -1.61
ERCC8-203ENST00000439176 PUS1Q9Y606 427 aaKnown RBP eCLIP5□□□□□ -1.61
ERCC8-203ENST00000439176 ALMS1Q8TCU4 4167 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 C3orf85A0A1B0GTC6 90 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 C11orf94C9JXX5 98 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 M0QYG6 137 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 HPGDSO60760 199 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 TMEM50AO95807 157 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 IGKV1-39P01597 117 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 IGKV1D-39P04432 117 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 ELK1P19419 428 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 ETV6P41212 452 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 AP2S1P53680 142 aaPredicted RBP4.99□□□□□ -1.61
ERCC8-203ENST00000439176 TAS2R19P59542 299 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 DEFB131AP59861 70 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 VBP1P61758 197 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 NCS1P62166 190 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 EWSR1Q01844 656 aaKnown RBP eCLIP4.99□□□□□ -1.61
ERCC8-203ENST00000439176 SPINK9Q5DT21 86 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 FAM90A2PQ658T7 463 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 LEMD1Q68G75 181 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 MORN3Q6PF18 240 aaPredicted RBP4.99□□□□□ -1.61
ERCC8-203ENST00000439176 NOXA1Q86UR1 476 aa4.99□□□□□ -1.61
ERCC8-203ENST00000439176 FAM219AQ8IW50 185 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms