RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 TSPAN4O14817 238 aa13.67□□□□□ -0.22
HMGN1-207ENST00000436324 OPRK1P41145 380 aa13.67□□□□□ -0.22
HMGN1-207ENST00000436324 AP3S2P59780 193 aa13.67□□□□□ -0.22
HMGN1-207ENST00000436324 ZNF79Q15937 498 aa13.67□□□□□ -0.22
HMGN1-207ENST00000436324 PVRIGQ6DKI7 326 aa13.67□□□□□ -0.22
HMGN1-207ENST00000436324 TOMM20LQ6UXN7 152 aa13.67□□□□□ -0.22
HMGN1-207ENST00000436324 OR52E5Q8NH55 327 aa13.67□□□□□ -0.22
HMGN1-207ENST00000436324 GALNT14Q96FL9 552 aa13.67□□□□□ -0.22
HMGN1-207ENST00000436324 RNF2Q99496 336 aa13.67□□□□□ -0.22
HMGN1-207ENST00000436324 RHPN1-AS1Q9BWJ2 59 aa13.67□□□□□ -0.22
HMGN1-207ENST00000436324 FNDC4Q9H6D8 234 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-207ENST00000436324 MRPL36Q9P0J6 103 aaKnown RBP13.67□□□□□ -0.22
HMGN1-207ENST00000436324 STAB2Q8WWQ8 2551 aa13.67□□□□□ -0.22
HMGN1-207ENST00000436324 TENM3Q9P273 2699 aa13.67□□□□□ -0.22
HMGN1-207ENST00000436324 IGKV3-7A0A075B6H7 116 aa13.66□□□□□ -0.22
HMGN1-207ENST00000436324 TRAV14DV4A0A0A6YYC5 116 aa13.66□□□□□ -0.22
HMGN1-207ENST00000436324 CORTO00230 105 aa13.66□□□□□ -0.22
HMGN1-207ENST00000436324 CHEK1O14757 476 aa13.66□□□□□ -0.22
HMGN1-207ENST00000436324 TMEM50AO95807 157 aa13.66□□□□□ -0.22
HMGN1-207ENST00000436324 LYL1P12980 280 aa13.66□□□□□ -0.22
HMGN1-207ENST00000436324 SUPT4H1P63272 117 aaKnown RBP13.66□□□□□ -0.22
HMGN1-207ENST00000436324 AARDQ4LEZ3 155 aa13.66□□□□□ -0.22
HMGN1-207ENST00000436324 LYZL2Q7Z4W2 148 aa13.66□□□□□ -0.22
HMGN1-207ENST00000436324 TMED4Q7Z7H5 227 aa13.66□□□□□ -0.22
HMGN1-207ENST00000436324 CCDC190Q86UF4 302 aa13.66□□□□□ -0.22
HMGN1-207ENST00000436324 SULT1A3P0DMM9 295 aa13.65□□□□□ -0.22
HMGN1-207ENST00000436324 SULT1A4P0DMN0 295 aa13.65□□□□□ -0.22
HMGN1-207ENST00000436324 TFPI2P48307 235 aa13.65□□□□□ -0.22
HMGN1-207ENST00000436324 ZFAND6Q6FIF0 208 aa13.65□□□□□ -0.22
HMGN1-207ENST00000436324 IL22RA2Q969J5 263 aa13.65□□□□□ -0.22
HMGN1-207ENST00000436324 OR10C1Q96KK4 312 aa13.65□□□□□ -0.22
HMGN1-207ENST00000436324 EDA2RQ9HAV5 297 aa13.65□□□□□ -0.22
HMGN1-207ENST00000436324 PUS1Q9Y606 427 aaKnown RBP eCLIP13.65□□□□□ -0.22
HMGN1-207ENST00000436324 LOC102724200A0A096LPH7 203 aaPredicted RBP13.64□□□□□ -0.23
HMGN1-207ENST00000436324 IGHV3-66A0A0C4DH42 116 aa13.64□□□□□ -0.23
HMGN1-207ENST00000436324 ANXA3P12429 323 aa13.64□□□□□ -0.23
HMGN1-207ENST00000436324 HTR2BP41595 481 aa13.64□□□□□ -0.23
HMGN1-207ENST00000436324 BSXQ3C1V8 233 aa13.64□□□□□ -0.23
HMGN1-207ENST00000436324 CASC10Q5T4H9 136 aa13.64□□□□□ -0.23
HMGN1-207ENST00000436324 ZNF600Q6ZNG1 722 aa13.64□□□□□ -0.23
HMGN1-207ENST00000436324 LGI3Q8N145 548 aa13.64□□□□□ -0.23
HMGN1-207ENST00000436324 GINS3Q9BRX5 216 aa13.64□□□□□ -0.23
HMGN1-207ENST00000436324 GGTLC1Q9BX51 225 aa13.64□□□□□ -0.23
HMGN1-207ENST00000436324 A0A1B0GU03 582 aa13.63□□□□□ -0.23
HMGN1-207ENST00000436324 OR4C46A6NHA9 309 aa13.63□□□□□ -0.23
HMGN1-207ENST00000436324 ZNF701M0R085 212 aaPredicted RBP13.63□□□□□ -0.23
HMGN1-207ENST00000436324 CLN5O75503 358 aa13.63□□□□□ -0.23
HMGN1-207ENST00000436324 APOHP02749 345 aaPredicted RBP13.63□□□□□ -0.23
HMGN1-207ENST00000436324 SPANXN2Q5MJ10 180 aa13.63□□□□□ -0.23
HMGN1-207ENST00000436324 GBGT1Q8N5D6 347 aa13.63□□□□□ -0.23
HMGN1-207ENST00000436324 OR4X1Q8NH49 305 aa13.63□□□□□ -0.23
HMGN1-207ENST00000436324 ST8SIA2Q92186 375 aa13.63□□□□□ -0.23
HMGN1-207ENST00000436324 A0A0B4J2A0 478 aa13.62□□□□□ -0.23
HMGN1-207ENST00000436324 RPS10-NUDT3A0A1W2PQS6 291 aa13.62□□□□□ -0.23
HMGN1-207ENST00000436324 CCR6P51684 374 aa13.62□□□□□ -0.23
HMGN1-207ENST00000436324 SMCO1Q147U7 214 aa13.62□□□□□ -0.23
HMGN1-207ENST00000436324 ODF3L2Q3SX64 289 aa13.62□□□□□ -0.23
HMGN1-207ENST00000436324 TIGITQ495A1 244 aa13.62□□□□□ -0.23
HMGN1-207ENST00000436324 C2orf83Q53S99 150 aa13.62□□□□□ -0.23
HMGN1-207ENST00000436324 SLC24A4Q8NFF2 622 aa13.62□□□□□ -0.23
HMGN1-207ENST00000436324 ZFAND3Q9H8U3 227 aa13.62□□□□□ -0.23
HMGN1-207ENST00000436324 SHPKQ9UHJ6 478 aa13.62□□□□□ -0.23
HMGN1-207ENST00000436324 VAMP1P23763 118 aa13.61□□□□□ -0.23
HMGN1-207ENST00000436324 TNFRSF9Q07011 255 aa13.61□□□□□ -0.23
HMGN1-207ENST00000436324 NMSQ5H8A3 153 aa13.61□□□□□ -0.23
HMGN1-207ENST00000436324 TCF24Q7RTU0 167 aa13.61□□□□□ -0.23
HMGN1-207ENST00000436324 WFDC3Q8IUB2 231 aa13.61□□□□□ -0.23
HMGN1-207ENST00000436324 LILRB2Q8N423 598 aa13.61□□□□□ -0.23
HMGN1-207ENST00000436324 OR1S1Q8NH92 325 aa13.61□□□□□ -0.23
HMGN1-207ENST00000436324 TMEM170AQ8WVE7 144 aa13.61□□□□□ -0.23
HMGN1-207ENST00000436324 SRRQ9GZT4 340 aa13.61□□□□□ -0.23
HMGN1-207ENST00000436324 RBKSQ9H477 322 aa13.61□□□□□ -0.23
HMGN1-207ENST00000436324 LINC00854A0A1B0GVQ3 168 aa13.6□□□□□ -0.23
HMGN1-207ENST00000436324 IFNA10P01566 189 aa13.6□□□□□ -0.23
HMGN1-207ENST00000436324 RPL35AP18077 110 aaKnown RBP13.6□□□□□ -0.23
HMGN1-207ENST00000436324 NPY1RP25929 384 aa13.6□□□□□ -0.23
HMGN1-207ENST00000436324 INPP1P49441 399 aa13.6□□□□□ -0.23
HMGN1-207ENST00000436324 RND2P52198 227 aa13.6□□□□□ -0.23
HMGN1-207ENST00000436324 SRPXP78539 464 aa13.6□□□□□ -0.23
HMGN1-207ENST00000436324 TMEM128Q5BJH2 165 aa13.6□□□□□ -0.23
HMGN1-207ENST00000436324 APRG1Q8IVJ8 170 aa13.6□□□□□ -0.23
HMGN1-207ENST00000436324 SCGB2A1O75556 95 aa13.59□□□□□ -0.23
HMGN1-207ENST00000436324 DFFBO76075 338 aa13.59□□□□□ -0.23
HMGN1-207ENST00000436324 IGKV1-17P01599 117 aa13.59□□□□□ -0.23
HMGN1-207ENST00000436324 BMI1P35226 326 aa13.59□□□□□ -0.23
HMGN1-207ENST00000436324 RPL11P62913 178 aaKnown RBP13.59□□□□□ -0.23
HMGN1-207ENST00000436324 FAM90A2PQ658T7 463 aa13.59□□□□□ -0.23
HMGN1-207ENST00000436324 PRSS54Q6PEW0 395 aa13.59□□□□□ -0.23
HMGN1-207ENST00000436324 RNASEH2CQ8TDP1 164 aaKnown RBP13.59□□□□□ -0.23
HMGN1-207ENST00000436324 DTD1Q8TEA8 209 aa13.59□□□□□ -0.23
HMGN1-207ENST00000436324 SLC25A21Q9BQT8 299 aaPredicted RBP13.59□□□□□ -0.23
HMGN1-207ENST00000436324 VSIRQ9H7M9 311 aa13.59□□□□□ -0.23
HMGN1-207ENST00000436324 HSPB7Q9UBY9 170 aa13.59□□□□□ -0.23
HMGN1-207ENST00000436324 CACFD1Q9UGQ2 172 aa13.59□□□□□ -0.23
HMGN1-207ENST00000436324 TRAV30A0A087WSZ9 112 aa13.58□□□□□ -0.24
HMGN1-207ENST00000436324 NPPCP23582 126 aa13.58□□□□□ -0.24
HMGN1-207ENST00000436324 PPP1R1AQ13522 171 aa13.58□□□□□ -0.24
HMGN1-207ENST00000436324 ZNF124Q15973 351 aa13.58□□□□□ -0.24
HMGN1-207ENST00000436324 BAK1Q16611 211 aa13.58□□□□□ -0.24
HMGN1-207ENST00000436324 TRIQKQ629K1 86 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms