RNA–Protein interactions for RNA: ENST00000435142.1

USP9YP28-201, Transcript of USP9Y pseudogene 28, humanhuman

BASIC

Gene USP9YP28, Length 589 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP28-201ENST00000435142 ASAH2BP0C7U1 165 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 BAALC-AS2P0C853 105 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 SMIM10L2AP0DMW4 78 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 SMIM10L2BP0DMW5 78 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 OMPP47874 163 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 RAB4BP61018 213 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 KHDC3LQ587J8 217 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 SPOPLQ6IQ16 392 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 HIST3H2BBQ8N257 126 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 CLDN22Q8N7P3 220 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 DNAJC9Q8WXX5 260 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 C8orf76Q96K31 380 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 PARVGQ9HBI0 331 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 TAS2R4Q9NYW5 299 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 ERGIC3Q9Y282 383 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 WRNQ14191 1432 aaPredicted RBP eCLIP0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 RIC1Q4ADV7 1423 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 RALGAPA2Q2PPJ7 1873 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 ROS1P08922 2347 aa0.46□□□□□ -2.34
USP9YP28-201ENST00000435142 HEATR5BQ9P2D3 2071 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 TRBV6-7A0A0A0MS04 114 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 IGKV1-9A0A0C4DH69 117 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 HYPMO75409 117 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 OR2J2O76002 312 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 ZNF93P35789 620 aaPredicted RBP0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 CEBPGP53567 150 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 CDC42P60953 191 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 IAH1Q2TAA2 248 aaPredicted RBP0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 TRAPPC6BQ86SZ2 158 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 OOSP2Q86WS3 158 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 OR6V1Q8N148 313 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 SIGLECL1Q8N7X8 197 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 BORCS7Q96B45 105 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 CCDC42Q96M95 316 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 TMEM147Q9BVK8 224 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 PARD6GQ9BYG4 376 aaPredicted RBP0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 CCDC90BQ9GZT6 254 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 DCSTAMPQ9H295 470 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 ACER3Q9NUN7 267 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 NHP2Q9NX24 153 aaKnown RBP0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 KLK9Q9UKQ9 250 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 SNAPC4Q5SXM2 1469 aa0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 NCOA6Q14686 2063 aaPredicted RBP0.45□□□□□ -2.34
USP9YP28-201ENST00000435142 TOPBP1Q92547 1522 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 A0A087WUJ7 227 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 M0R2N4 97 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 PIRO00625 290 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 RPP14O95059 124 aaKnown RBP0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 CNIH1O95406 144 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 RBP1P09455 135 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 S100A4P26447 101 aaKnown RBP0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 SSR2P43308 183 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 CNBPP62633 177 aaKnown RBP0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 RHOGP84095 191 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 RGS21Q2M5E4 152 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 TRAPPC5Q8IUR0 188 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 C12orf45Q8N5I9 185 aaPredicted RBP0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 Q8N814 137 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 OR8J2Q8NGG1 315 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 OR13D1Q8NGV5 346 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 ZNF418Q8TF45 676 aaPredicted RBP0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 CT55Q8WUE5 264 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 SFT2D1Q8WV19 159 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 C2orf50Q96LR7 162 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 OSTCQ9NRP0 149 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 CYSLTR1Q9Y271 337 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 HS3ST2Q9Y278 367 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 ZFP30Q9Y2G7 519 aa0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 ZNF469Q96JG9 3925 aaPredicted RBP0.44□□□□□ -2.34
USP9YP28-201ENST00000435142 MICAL3Q7RTP6 2002 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 MAST2Q6P0Q8 1798 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 TRAV12-1A0A0B4J245 112 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 TRAV1-1A0A0B4J248 108 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 FAM236DA0A1B0GTK5 79 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 C7orf71A4D174 169 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 LYZL6O75951 148 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 PROSCO94903 275 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 OR4E1P0C645 316 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 FAM236CP0DP71 79 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 MGST1P10620 155 aaKnown RBP0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 CASP1P29466 404 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 DEFA1P59665 94 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 YPEL3P61236 119 aaPredicted RBP0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 EDDM3AQ14507 147 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 LINC01554Q52M75 96 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 RNASE10Q5GAN6 216 aaKnown RBP0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 KRT222Q8N1A0 295 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 OR52R1Q8NGF1 315 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 OR10J5Q8NHC4 309 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 C4orf3Q8WVX3 66 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 OBSCN-AS1Q96MR7 158 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 CMSS1Q9BQ75 279 aaKnown RBP0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 EPDR1Q9UM22 224 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 SLC35A3Q9Y2D2 325 aa0.43□□□□□ -2.34
USP9YP28-201ENST00000435142 FBN2P35556 2912 aa0.42□□□□□ -2.34
USP9YP28-201ENST00000435142 hADV38S2A0JD32 116 aa0.42□□□□□ -2.34
USP9YP28-201ENST00000435142 CLDN25C9JDP6 229 aa0.42□□□□□ -2.34
USP9YP28-201ENST00000435142 J3QRK9 145 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms