RNA–Protein interactions for RNA: ENST00000433889.1

SCG2-203, Transcript of secretogranin II, humanhuman

TSL 4

Gene SCG2, Length 544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-203ENST00000433889 PFN4Q8NHR9 129 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 NIPSNAP1Q9BPW8 284 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 OSTCQ9NRP0 149 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 TOPBP1Q92547 1522 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 CLDN24A6NM45 220 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 C1orf196B1AJZ1 125 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 SULT1B1O43704 296 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 CHP2O43745 196 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 NIPSNAP2O75323 286 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 RPP14O95059 124 aaKnown RBP0.77□□□□□ -2.29
SCG2-203ENST00000433889 TCL1BO95988 128 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 CTSDP07339 412 aaPredicted RBP0.77□□□□□ -2.29
SCG2-203ENST00000433889 RHOBP62745 196 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 ACOT6Q3I5F7 207 aaPredicted RBP0.77□□□□□ -2.29
SCG2-203ENST00000433889 FAM19A2Q8N3H0 131 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 CLDN22Q8N7P3 220 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 TERB2Q8NHR7 220 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 GPR146Q96CH1 333 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 ACER3Q9NUN7 267 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 WRNQ14191 1432 aaPredicted RBP eCLIP0.77□□□□□ -2.29
SCG2-203ENST00000433889 RIC1Q4ADV7 1423 aa0.77□□□□□ -2.29
SCG2-203ENST00000433889 ADCY9O60503 1353 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 MTUS2Q5JR59 1369 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.76□□□□□ -2.29
SCG2-203ENST00000433889 TRAV3A0A0B4J244 114 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 GOLGA6L19H0YKK7 550 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 OR1I1O60431 355 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 HYPMO75409 117 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 PROSCO94903 275 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 RBP1P09455 135 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 RNASE3P12724 160 aaKnown RBP0.76□□□□□ -2.29
SCG2-203ENST00000433889 CASP1P29466 404 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 SSR2P43308 183 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 RAB4BP61018 213 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 TAS2R4Q9NYW5 299 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 SLC35A3Q9Y2D2 325 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 NOSIPQ9Y314 301 aaKnown RBP0.76□□□□□ -2.29
SCG2-203ENST00000433889 SCN10AQ9Y5Y9 1956 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 PLXND1Q9Y4D7 1925 aa0.76□□□□□ -2.29
SCG2-203ENST00000433889 HECW1Q76N89 1606 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 NCOA1Q15788 1441 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 CACNA1BQ00975 2339 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 NUP155O75694 1391 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 TRBV6-8A0A0A6YYG3 113 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 TRAV26-2A0A0B4J265 109 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 FAM236DA0A1B0GTK5 79 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 C2orf70A6NJV1 201 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 BUB1B-PAK6H3BSN5 160 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 C19orf84I3L1E1 186 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 OR2B3O76000 313 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 UBL3O95164 117 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 SMIM17P0DL12 118 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 FAM236CP0DP71 79 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 COX6A1P12074 109 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 DEFA3P59666 94 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 CDC42P60953 191 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 IMPG1Q17R60 797 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 TSPAN32Q96QS1 320 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 PARD6GQ9BYG4 376 aaPredicted RBP0.75□□□□□ -2.29
SCG2-203ENST00000433889 TRIM4Q9C037 500 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 C6orf62Q9GZU0 229 aaPredicted RBP0.75□□□□□ -2.29
SCG2-203ENST00000433889 MIXL1Q9H2W2 232 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 UBAP1Q9NZ09 502 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 CEP192Q8TEP8 1941 aa0.75□□□□□ -2.29
SCG2-203ENST00000433889 SCN3AQ9NY46 2000 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 hCG_1818297A0A087WSY0 165 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 A8MT66 165 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 CNIH1O95406 144 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 TTRP02766 147 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 SERPINA6P08185 405 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 BAALC-AS2P0C853 105 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 YPEL3P61236 119 aaPredicted RBP0.74□□□□□ -2.29
SCG2-203ENST00000433889 CTAG1AP78358 180 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 RHOGP84095 191 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 AESQ08117 197 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 KRTAP5-10Q6L8G5 202 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 OR52R1Q8NGF1 315 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 CT55Q8WUE5 264 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 SFT2D1Q8WV19 159 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 BORCS7Q96B45 105 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 OBSCN-AS1Q96MR7 158 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 OR51V1Q9H2C8 321 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 PARVGQ9HBI0 331 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 MRPL27Q9P0M9 148 aaKnown RBP0.74□□□□□ -2.29
SCG2-203ENST00000433889 ZFP30Q9Y2G7 519 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 UTP11Q9Y3A2 253 aaKnown RBP0.74□□□□□ -2.29
SCG2-203ENST00000433889 HECW2Q9P2P5 1572 aa0.74□□□□□ -2.29
SCG2-203ENST00000433889 ZNF106Q9H2Y7 1883 aaKnown RBP0.73□□□□□ -2.29
SCG2-203ENST00000433889 CCDC160A6NGH7 325 aa0.73□□□□□ -2.29
SCG2-203ENST00000433889 SMIM10L2AP0DMW4 78 aa0.73□□□□□ -2.29
SCG2-203ENST00000433889 SMIM10L2BP0DMW5 78 aa0.73□□□□□ -2.29
SCG2-203ENST00000433889 SPA17Q15506 151 aa0.73□□□□□ -2.29
SCG2-203ENST00000433889 RGS21Q2M5E4 152 aa0.73□□□□□ -2.29
SCG2-203ENST00000433889 TEX261Q6UWH6 196 aa0.73□□□□□ -2.29
SCG2-203ENST00000433889 CLECL1Q8IZS7 167 aa0.73□□□□□ -2.29
SCG2-203ENST00000433889 Q8N814 137 aa0.73□□□□□ -2.29
SCG2-203ENST00000433889 GDPD1Q8N9F7 314 aa0.73□□□□□ -2.29
SCG2-203ENST00000433889 C20orf27Q9GZN8 174 aa0.73□□□□□ -2.29
SCG2-203ENST00000433889 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.73□□□□□ -2.29
SCG2-203ENST00000433889 C14orf105Q9NVL8 296 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms