RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 ZXDCQ2QGD7 858 aaPredicted RBP13.91□□□□□ -0.18
RIF1-204ENST00000430328 RSPO2Q6UXX9 243 aaPredicted RBP13.91□□□□□ -0.18
RIF1-204ENST00000430328 S4R3C0 116 aa13.91□□□□□ -0.18
RIF1-204ENST00000430328 A0A1W2PRE2 83 aa13.9□□□□□ -0.18
RIF1-204ENST00000430328 RPL34P49207 117 aaKnown RBP13.9□□□□□ -0.18
RIF1-204ENST00000430328 RNF115Q9Y4L5 304 aa13.9□□□□□ -0.18
RIF1-204ENST00000430328 C1orf210Q8IVY1 113 aa13.9□□□□□ -0.18
RIF1-204ENST00000430328 DSCR8Q96T75 97 aa13.9□□□□□ -0.18
RIF1-204ENST00000430328 HIST1H2BLQ99880 126 aa13.9□□□□□ -0.18
RIF1-204ENST00000430328 ZIC1Q15915 447 aa13.9□□□□□ -0.18
RIF1-204ENST00000430328 VN1R4Q7Z5H5 301 aa13.9□□□□□ -0.18
RIF1-204ENST00000430328 TRBV5-5A0A0J9YX44 114 aa13.9□□□□□ -0.18
RIF1-204ENST00000430328 A0A1W2PQF6 199 aa13.9□□□□□ -0.18
RIF1-204ENST00000430328 HOXB3P14651 431 aaPredicted RBP13.9□□□□□ -0.18
RIF1-204ENST00000430328 PGFP49763 221 aa13.9□□□□□ -0.18
RIF1-204ENST00000430328 Q96M66 194 aa13.9□□□□□ -0.18
RIF1-204ENST00000430328 DOCK2Q92608 1830 aa13.9□□□□□ -0.18
RIF1-204ENST00000430328 IGHG3P01860 377 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 OR9G9P0C7N8 305 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 KLF17Q5JT82 389 aaPredicted RBP13.89□□□□□ -0.19
RIF1-204ENST00000430328 COL16A1Q07092 1604 aaPredicted RBP13.89□□□□□ -0.19
RIF1-204ENST00000430328 TM4SF5O14894 197 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 SELENOKQ9Y6D0 94 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 IGHV1-69-2A0A0G2JMI3 117 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 IGKV1D-33P01593 117 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 IGKV1-33P01594 117 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 MYMXA0A1B0GTQ4 84 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 MIR17HGQ75NE6 70 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 IQCF6A8MYZ5 107 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 SP9P0CG40 484 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 C5P01031 1676 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 IFITM3Q01628 133 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 ACTL10Q5JWF8 245 aa13.89□□□□□ -0.19
RIF1-204ENST00000430328 HAPLN4Q86UW8 402 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 ERCC8Q13216 396 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 C1orf100Q5SVJ3 147 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 TOPAZ1Q8N9V7 1692 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 TJP1Q07157 1748 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 DRD3P35462 400 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 MAFAQ8NHW3 353 aaPredicted RBP13.88□□□□□ -0.19
RIF1-204ENST00000430328 MYEOVQ96EZ4 313 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 CFHR5Q9BXR6 569 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 KDM3BQ7LBC6 1761 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 DOCK3Q8IZD9 2030 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 HRKO00198 91 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 IFITM2Q01629 132 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 Q6ZS52 159 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 KLF14Q8TD94 323 aaPredicted RBP13.88□□□□□ -0.19
RIF1-204ENST00000430328 hADV29S1A0JD25 119 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 TCRAP04437 139 aa13.88□□□□□ -0.19
RIF1-204ENST00000430328 NPIPB13A6NJU9 1138 aa13.87□□□□□ -0.19
RIF1-204ENST00000430328 NPIPB5A8MRT5 1133 aa13.87□□□□□ -0.19
RIF1-204ENST00000430328 TMEM240Q5SV17 173 aa13.87□□□□□ -0.19
RIF1-204ENST00000430328 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.87□□□□□ -0.19
RIF1-204ENST00000430328 IGHV3OR16-10A0A075B7F0 116 aa13.87□□□□□ -0.19
RIF1-204ENST00000430328 HAMPP81172 84 aa13.87□□□□□ -0.19
RIF1-204ENST00000430328 CACNA1GO43497 2377 aa13.87□□□□□ -0.19
RIF1-204ENST00000430328 TBX6O95947 436 aaPredicted RBP13.87□□□□□ -0.19
RIF1-204ENST00000430328 CEACAM8P31997 349 aaPredicted RBP13.87□□□□□ -0.19
RIF1-204ENST00000430328 RPL39P5Q59GN2 51 aa13.87□□□□□ -0.19
RIF1-204ENST00000430328 ASPHD2Q6ICH7 369 aa13.87□□□□□ -0.19
RIF1-204ENST00000430328 ZNRF1Q8ND25 227 aa13.87□□□□□ -0.19
RIF1-204ENST00000430328 MMP23AO75900 390 aa13.87□□□□□ -0.19
RIF1-204ENST00000430328 UCNP55089 124 aa13.87□□□□□ -0.19
RIF1-204ENST00000430328 DPM3Q9P2X0 92 aa13.86□□□□□ -0.19
RIF1-204ENST00000430328 SCRT1Q9BWW7 348 aa13.86□□□□□ -0.19
RIF1-204ENST00000430328 DOT1LQ8TEK3 1739 aa13.86□□□□□ -0.19
RIF1-204ENST00000430328 NDUFS5O43920 106 aa13.86□□□□□ -0.19
RIF1-204ENST00000430328 C1orf194Q5T5A4 169 aa13.86□□□□□ -0.19
RIF1-204ENST00000430328 NOVP48745 357 aa13.86□□□□□ -0.19
RIF1-204ENST00000430328 GNG5P63218 68 aa13.86□□□□□ -0.19
RIF1-204ENST00000430328 ZNF703Q9H7S9 590 aaPredicted RBP13.86□□□□□ -0.19
RIF1-204ENST00000430328 EML6Q6ZMW3 1958 aa13.86□□□□□ -0.19
RIF1-204ENST00000430328 IGHV5-10-1A0A0J9YXX1 117 aa13.86□□□□□ -0.19
RIF1-204ENST00000430328 LILRA1O75019 489 aa13.86□□□□□ -0.19
RIF1-204ENST00000430328 A0A1W2PRX2 142 aa13.85□□□□□ -0.19
RIF1-204ENST00000430328 C9orf40Q8IXQ3 194 aa13.85□□□□□ -0.19
RIF1-204ENST00000430328 ATP6V0BQ99437 205 aa13.85□□□□□ -0.19
RIF1-204ENST00000430328 ZPLD1Q8TCW7 415 aa13.85□□□□□ -0.19
RIF1-204ENST00000430328 TSKUQ8WUA8 353 aa13.85□□□□□ -0.19
RIF1-204ENST00000430328 CHKB-CPT1BH3BT56 60 aa13.85□□□□□ -0.19
RIF1-204ENST00000430328 PPIFP30405 207 aaKnown RBP13.85□□□□□ -0.19
RIF1-204ENST00000430328 RFLNBQ8N5W9 214 aa13.85□□□□□ -0.19
RIF1-204ENST00000430328 WFDC6Q9BQY6 131 aa13.85□□□□□ -0.19
RIF1-204ENST00000430328 UTF1Q5T230 341 aa13.84□□□□□ -0.19
RIF1-204ENST00000430328 COX14Q96I36 57 aa13.84□□□□□ -0.19
RIF1-204ENST00000430328 PRIMA1Q86XR5 153 aa13.84□□□□□ -0.19
RIF1-204ENST00000430328 HEPN1Q6WQI6 88 aa13.84□□□□□ -0.19
RIF1-204ENST00000430328 IGHV1OR15-9A0A0B4J2B8 117 aa13.84□□□□□ -0.19
RIF1-204ENST00000430328 A0A0J9YW62 118 aa13.84□□□□□ -0.19
RIF1-204ENST00000430328 Q5BKY6 102 aa13.84□□□□□ -0.19
RIF1-204ENST00000430328 MSGN1A6NI15 193 aa13.84□□□□□ -0.19
RIF1-204ENST00000430328 RASL11AQ6T310 242 aa13.84□□□□□ -0.19
RIF1-204ENST00000430328 IGHV3OR16-8A0A075B7F1 116 aa13.84□□□□□ -0.19
RIF1-204ENST00000430328 TRAV14DV4A0A0A6YYC5 116 aa13.84□□□□□ -0.19
RIF1-204ENST00000430328 FAM90A9PA6NNJ1 464 aa13.83□□□□□ -0.19
RIF1-204ENST00000430328 RPRMLQ8N4K4 120 aa13.83□□□□□ -0.19
RIF1-204ENST00000430328 PSG8Q9UQ74 426 aa13.83□□□□□ -0.19
RIF1-204ENST00000430328 CELA2BP08218 269 aaPredicted RBP13.83□□□□□ -0.2
RIF1-204ENST00000430328 RPL36AP83881 106 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms