RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 C3orf79P0CE67 100 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 SAA1P0DJI8 122 aaPredicted RBP10.2□□□□□ -0.78
CDH3-202ENST00000429102 COL5A1-AS1Q5SY13 56 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 WFDC8Q8IUA0 241 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 JPT1Q9UK76 154 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 ZNF835Q9Y2P0 537 aa10.2□□□□□ -0.78
CDH3-202ENST00000429102 TNFSF13O75888 250 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 S4R3C0 116 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 PAFAH1B2P68402 229 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 STPG4Q8N801 248 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 OR52E5Q8NH55 327 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 MRPL20Q9BYC9 149 aaKnown RBP10.19□□□□□ -0.78
CDH3-202ENST00000429102 CDC42EP3Q9UKI2 254 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 MUC21A0A0G2JKD1 596 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 MUC21A0A140T8X8 626 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 DPRXA6NFQ7 191 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 SRRM5B3KS81 715 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 BMPR1BO00238 502 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 TNXAQ16473 311 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 C17orf58Q2M2W7 97 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 MUC21Q5SSG8 566 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 OR4C5Q8NGB2 326 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 VPS25Q9BRG1 176 aa10.19□□□□□ -0.78
CDH3-202ENST00000429102 TDGF1P13385 188 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 YPEL3P61236 119 aaPredicted RBP10.18□□□□□ -0.78
CDH3-202ENST00000429102 OR10X1Q8NGY0 326 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 ZNF503Q96F45 646 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 ZC2HC1AQ96GY0 325 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 AMMECR1Q9Y4X0 333 aaPredicted RBP10.18□□□□□ -0.78
CDH3-202ENST00000429102 TEX50A0A1B0GTY4 177 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 ISLRO14498 428 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 YPEL1O60688 119 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 CD99P14209 185 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 FLYWCH2Q96CP2 140 aaKnown RBP10.18□□□□□ -0.78
CDH3-202ENST00000429102 YPEL2Q96QA6 119 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 KIR2DL5BA0A0G2JN68 375 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 KIR2DL5BA0A0G2JPC4 375 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 SLC25A17O43808 307 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 APOA2P02652 100 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 SLC25A5P05141 298 aaKnown RBP10.18□□□□□ -0.78
CDH3-202ENST00000429102 KIR2DL5AQ8N109 375 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 SARAFQ96BY9 339 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 SLC35E1Q96K37 410 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 SAP30LQ9HAJ7 183 aa10.18□□□□□ -0.78
CDH3-202ENST00000429102 LSM4Q9Y4Z0 139 aaKnown RBP10.18□□□□□ -0.78
CDH3-202ENST00000429102 TRAV8-1A0A0A6YYK1 113 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 KBTBD11-OT1A0A1B0GTJ5 212 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 SELENOVP59797 346 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 RAB1CQ92928 201 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 ARHGAP32A7KAX9 2087 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 CT45A6P0DMU7 189 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 CT45A5P0DMU8 189 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 CT45A7P0DMV0 189 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 UBE2G1P62253 170 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 TRIP6Q15654 476 aaKnown RBP10.17□□□□□ -0.78
CDH3-202ENST00000429102 RTL8BQ17RB0 113 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 PGLYRP4Q96LB8 373 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 GUCD1Q96NT3 240 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 CLEC7AQ9BXN2 247 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 WASHC3Q9Y3C0 194 aa10.17□□□□□ -0.78
CDH3-202ENST00000429102 PGPA6NDG6 321 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 TMEM136Q6ZRR5 245 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 ZNF596Q8TC21 504 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 TPSG1Q9NRR2 321 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 MRPL36Q9P0J6 103 aaKnown RBP10.16□□□□□ -0.78
CDH3-202ENST00000429102 PRSS46E5RG02 174 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 C8orf88P0DMB2 117 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 TAS2R45P59539 299 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 DNLZQ5SXM8 178 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 OR8B2Q96RD0 313 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 PAXXQ9BUH6 204 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 TMEM167BQ9NRX6 74 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 HIGD1CA8MV81 97 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 SSX8Q7RTT4 187 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 TSKUQ8WUA8 353 aa10.16□□□□□ -0.78
CDH3-202ENST00000429102 ZNF71Q9NQZ8 489 aaPredicted RBP10.16□□□□□ -0.78
CDH3-202ENST00000429102 ZNF324O75467 553 aaPredicted RBP10.15□□□□□ -0.78
CDH3-202ENST00000429102 ERHP84090 104 aaKnown RBP10.15□□□□□ -0.78
CDH3-202ENST00000429102 RNF7Q9UBF6 113 aa10.15□□□□□ -0.78
CDH3-202ENST00000429102 CX3CL1P78423 397 aa10.15□□□□□ -0.78
CDH3-202ENST00000429102 RUSC1-AS1Q66K80 236 aa10.15□□□□□ -0.78
CDH3-202ENST00000429102 ZNF474Q6S9Z5 364 aaPredicted RBP10.15□□□□□ -0.78
CDH3-202ENST00000429102 PRR7Q8TB68 274 aa10.15□□□□□ -0.78
CDH3-202ENST00000429102 NAA38Q9BRA0 125 aaKnown RBP10.15□□□□□ -0.78
CDH3-202ENST00000429102 M0QZK8 103 aa10.15□□□□□ -0.79
CDH3-202ENST00000429102 HYPMO75409 117 aa10.15□□□□□ -0.79
CDH3-202ENST00000429102 SP9P0CG40 484 aa10.15□□□□□ -0.79
CDH3-202ENST00000429102 PAX1P15863 534 aa10.15□□□□□ -0.79
CDH3-202ENST00000429102 C10orf113Q5VZT2 155 aa10.15□□□□□ -0.79
CDH3-202ENST00000429102 ZNF841Q6ZN19 808 aa10.15□□□□□ -0.79
CDH3-202ENST00000429102 Q71RC1 249 aaPredicted RBP10.15□□□□□ -0.79
CDH3-202ENST00000429102 RITA1Q96K30 269 aa10.15□□□□□ -0.79
CDH3-202ENST00000429102 LAMTOR2Q9Y2Q5 125 aa10.15□□□□□ -0.79
CDH3-202ENST00000429102 TMSB15BA0A087X1C1 80 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 PRR20EP86478 221 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 PRR20CP86479 221 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 PRR20DP86480 221 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 PRR20BP86481 221 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 PRR20AP86496 221 aa10.14□□□□□ -0.79
CDH3-202ENST00000429102 LINC00173Q6ZV60 143 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms