RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 TRAV9-1A0A075B6T8 112 aa11.02□□□□□ -0.64
THBS3-202ENST00000428962 IGHV1-3A0A0C4DH29 117 aa11.02□□□□□ -0.64
THBS3-202ENST00000428962 A0A1W2PRE2 83 aa11.02□□□□□ -0.64
THBS3-202ENST00000428962 PGPEP1LA6NFU8 196 aa11.02□□□□□ -0.64
THBS3-202ENST00000428962 LYNX1G3V0Z9 82 aa11.02□□□□□ -0.64
THBS3-202ENST00000428962 CORTO00230 105 aa11.02□□□□□ -0.64
THBS3-202ENST00000428962 LYNX1P0DP58 116 aa11.02□□□□□ -0.64
THBS3-202ENST00000428962 GATA2P23769 480 aaPredicted RBP11.02□□□□□ -0.64
THBS3-202ENST00000428962 GRNP28799 593 aaKnown RBP11.02□□□□□ -0.64
THBS3-202ENST00000428962 RPL27AP46776 148 aaKnown RBP11.02□□□□□ -0.64
THBS3-202ENST00000428962 SSTP61278 116 aa11.02□□□□□ -0.64
THBS3-202ENST00000428962 PRSS8Q16651 343 aa11.02□□□□□ -0.64
THBS3-202ENST00000428962 TMEM183AQ8IXX5 376 aa11.02□□□□□ -0.64
THBS3-202ENST00000428962 OCC1Q8TAD7 63 aa11.02□□□□□ -0.64
THBS3-202ENST00000428962 TPSG1Q9NRR2 321 aa11.02□□□□□ -0.64
THBS3-202ENST00000428962 AURKAIP1Q9NWT8 199 aaPredicted RBP11.02□□□□□ -0.64
THBS3-202ENST00000428962 SMG1Q96Q15 3661 aaKnown RBP11.02□□□□□ -0.64
THBS3-202ENST00000428962 PCNX1Q96RV3 2341 aa11.02□□□□□ -0.65
THBS3-202ENST00000428962 IGHV3-72A0A0B4J1Y9 119 aa11.02□□□□□ -0.65
THBS3-202ENST00000428962 PSMB11A5LHX3 300 aa11.02□□□□□ -0.65
THBS3-202ENST00000428962 ADORA2A-AS1P86434 159 aa11.02□□□□□ -0.65
THBS3-202ENST00000428962 CLEC12BQ2HXU8 276 aa11.02□□□□□ -0.65
THBS3-202ENST00000428962 SGMS2Q8NHU3 365 aa11.02□□□□□ -0.65
THBS3-202ENST00000428962 NPIPB3Q92617 1050 aa11.02□□□□□ -0.65
THBS3-202ENST00000428962 RPEQ96AT9 228 aa11.02□□□□□ -0.65
THBS3-202ENST00000428962 ZNF503Q96F45 646 aa11.02□□□□□ -0.65
THBS3-202ENST00000428962 EAF1Q96JC9 268 aaPredicted RBP11.02□□□□□ -0.65
THBS3-202ENST00000428962 GPR61Q9BZJ8 451 aa11.02□□□□□ -0.65
THBS3-202ENST00000428962 FNDC4Q9H6D8 234 aaPredicted RBP11.02□□□□□ -0.65
THBS3-202ENST00000428962 A0A0U1RQK1 487 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 IGLC7A0M8Q6 106 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 ZNF320A2RRD8 509 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 LIPFP07098 398 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 CRYGBP07316 175 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 GNG4P50150 75 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 UBE2L3P68036 154 aaKnown RBP11.01□□□□□ -0.65
THBS3-202ENST00000428962 TNXAQ16473 311 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 COA6Q5JTJ3 125 aaKnown RBP11.01□□□□□ -0.65
THBS3-202ENST00000428962 GFI1BQ5VTD9 330 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 C10orf113Q5VZT2 155 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 PVRIGQ6DKI7 326 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 OR10D4PQ8NGN7 298 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 OR1P1Q8NH06 330 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 TMEM37Q8WXS4 190 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 RNF5Q99942 180 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 GSN-AS1Q9NRJ2 163 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 CBLN4Q9NTU7 201 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 TNCP24821 2201 aa11.01□□□□□ -0.65
THBS3-202ENST00000428962 XKRY2A2RUG3 117 aa11□□□□□ -0.65
THBS3-202ENST00000428962 HELTA6NFD8 242 aa11□□□□□ -0.65
THBS3-202ENST00000428962 COX7A1P24310 79 aa11□□□□□ -0.65
THBS3-202ENST00000428962 COMPP49747 757 aaPredicted RBP11□□□□□ -0.65
THBS3-202ENST00000428962 MRGPRG-AS1Q2M3A8 158 aa11□□□□□ -0.65
THBS3-202ENST00000428962 PDZD11Q5EBL8 140 aa11□□□□□ -0.65
THBS3-202ENST00000428962 DNLZQ5SXM8 178 aa11□□□□□ -0.65
THBS3-202ENST00000428962 RITA1Q96K30 269 aa11□□□□□ -0.65
THBS3-202ENST00000428962 SLC25A2Q9BXI2 301 aa11□□□□□ -0.65
THBS3-202ENST00000428962 SIGLEC9Q9Y336 463 aa11□□□□□ -0.65
THBS3-202ENST00000428962 PKDREJQ9NTG1 2253 aa11□□□□□ -0.65
THBS3-202ENST00000428962 TRAV20A0A0B4J274 112 aa11□□□□□ -0.65
THBS3-202ENST00000428962 OR10J4P0C629 311 aa11□□□□□ -0.65
THBS3-202ENST00000428962 FABP4P15090 132 aa11□□□□□ -0.65
THBS3-202ENST00000428962 HNF1AP20823 631 aa11□□□□□ -0.65
THBS3-202ENST00000428962 CRYBB3P26998 211 aa11□□□□□ -0.65
THBS3-202ENST00000428962 PAX2Q02962 417 aa11□□□□□ -0.65
THBS3-202ENST00000428962 TIGITQ495A1 244 aa11□□□□□ -0.65
THBS3-202ENST00000428962 CENPWQ5EE01 88 aa11□□□□□ -0.65
THBS3-202ENST00000428962 OR5AU1Q8NGC0 362 aa11□□□□□ -0.65
THBS3-202ENST00000428962 NEU4Q8WWR8 484 aaPredicted RBP11□□□□□ -0.65
THBS3-202ENST00000428962 IL36BQ9NZH7 164 aa11□□□□□ -0.65
THBS3-202ENST00000428962 ONECUT1Q9UBC0 465 aa11□□□□□ -0.65
THBS3-202ENST00000428962 ATRXP46100 2492 aa11□□□□□ -0.65
THBS3-202ENST00000428962 ROS1P08922 2347 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 PIEZO2Q9H5I5 2752 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 IGKV1D-37A0A075B6S9 117 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 GGTLC3B5MD39 225 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 K7EN84 100 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 REG1AP05451 166 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 CRYGCP07315 174 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 PYY3Q5JQD4 70 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 PPP1R27Q86WC6 154 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 LY6G5BQ8NDX9 201 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 STXBP6Q8NFX7 210 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 MISP3Q96FF7 219 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 FAM167A-AS1Q96KT0 104 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 PACRGQ96M98 296 aaPredicted RBP10.99□□□□□ -0.65
THBS3-202ENST00000428962 TRGV9Q99603 122 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 ZNF355PQ9NSJ1 428 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 TRAPPC1Q9Y5R8 145 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 ATMQ13315 3056 aa10.99□□□□□ -0.65
THBS3-202ENST00000428962 PDLIM4P50479 330 aa10.98□□□□□ -0.65
THBS3-202ENST00000428962 RPL15P61313 204 aaKnown RBP10.98□□□□□ -0.65
THBS3-202ENST00000428962 SSBP2P81877 361 aaPredicted RBP10.98□□□□□ -0.65
THBS3-202ENST00000428962 RPL19P84098 196 aaKnown RBP10.98□□□□□ -0.65
THBS3-202ENST00000428962 PERPQ96FX8 193 aa10.98□□□□□ -0.65
THBS3-202ENST00000428962 HIST1H2BLQ99880 126 aa10.98□□□□□ -0.65
THBS3-202ENST00000428962 SRSF8Q9BRL6 282 aaKnown RBP10.98□□□□□ -0.65
THBS3-202ENST00000428962 PAXXQ9BUH6 204 aa10.98□□□□□ -0.65
THBS3-202ENST00000428962 BSNQ9UPA5 3926 aa10.98□□□□□ -0.65
THBS3-202ENST00000428962 CNN1P51911 297 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms