RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 RHNO1Q9BSD3 238 aa2.31□□□□□ -2.04
RGPD1-203ENST00000428128 REG4Q9BYZ8 158 aa2.31□□□□□ -2.04
RGPD1-203ENST00000428128 PKIGQ9Y2B9 76 aa2.31□□□□□ -2.04
RGPD1-203ENST00000428128 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.31□□□□□ -2.04
RGPD1-203ENST00000428128 ASPMQ8IZT6 3477 aa2.31□□□□□ -2.04
RGPD1-203ENST00000428128 RYR3Q15413 4870 aa2.31□□□□□ -2.04
RGPD1-203ENST00000428128 TLN1Q9Y490 2541 aaKnown RBP2.31□□□□□ -2.04
RGPD1-203ENST00000428128 IGHV4OR15-8A0A075B7B6 117 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 TRAV8-3A0A0A6YYJ7 113 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 IGHV3-16A0A0C4DH30 117 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 C20orf202A1L168 122 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 AGPAT2O15120 278 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 SS18L1O75177 396 aaPredicted RBP2.3□□□□□ -2.04
RGPD1-203ENST00000428128 HLA-DRB1P01911 266 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 GGT1P19440 569 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 PPP1CAP62136 330 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 ZNF146Q15072 292 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 PDGFRLQ15198 375 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 ZNF429Q86V71 674 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 APCDD1LQ8NCL9 501 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 ZNF555Q8NEP9 628 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 RPS4Y2Q8TD47 263 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 POP5Q969H6 163 aaKnown RBP2.3□□□□□ -2.04
RGPD1-203ENST00000428128 SLAMF6Q96DU3 332 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 LINC01587Q99440 93 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 SDF2Q99470 211 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 PSMG3Q9BT73 122 aaPredicted RBP2.3□□□□□ -2.04
RGPD1-203ENST00000428128 OR2H1Q9GZK4 316 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 V9GYH0 126 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 LYSTQ99698 3801 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 KNCNA6PVL3 124 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 SRSF10O75494 262 aaKnown RBP2.3□□□□□ -2.04
RGPD1-203ENST00000428128 HIST1H1DP16402 221 aaKnown RBP2.3□□□□□ -2.04
RGPD1-203ENST00000428128 SRPXP78539 464 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 QRFPP83859 136 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 DHRS2Q13268 280 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 CST6Q15828 149 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 ZNF141Q15928 474 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 UBE2SQ16763 222 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 ZNF880Q6PDB4 577 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 CHMP1BQ7LBR1 199 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 MKXQ8IYA7 352 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 OR4C16Q8NGL9 310 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 OR10D4PQ8NGN7 298 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 OR1N2Q8NGR9 330 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 KCNS1Q96KK3 526 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 PRADC1Q9BSG0 188 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 PARP11Q9NR21 331 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 ZNF629Q9UEG4 869 aaPredicted RBP2.3□□□□□ -2.04
RGPD1-203ENST00000428128 LINC00527Q9UJ94 153 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 IER3IP1Q9Y5U9 82 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 SMG1Q96Q15 3661 aaKnown RBP2.3□□□□□ -2.04
RGPD1-203ENST00000428128 MED13LQ71F56 2210 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 SPAARA0A1B0GVQ0 90 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 A0A1B0GW64 132 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 G3V3Q6 166 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 J3QRK9 145 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 RBFOX2O43251 390 aaKnown RBP eCLIP2.3□□□□□ -2.04
RGPD1-203ENST00000428128 SOD1P00441 154 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 IGLV2-8P01709 118 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 BRS3P32247 399 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 SELENOPP49908 381 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 C6orf99Q4VX62 202 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 OR5A2Q8NGI9 324 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 DCUN1D4Q92564 292 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 PEBP4Q96S96 227 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 IMUPQ9GZP8 106 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 EIF5A2Q9GZV4 153 aaKnown RBP2.3□□□□□ -2.04
RGPD1-203ENST00000428128 CACYBPQ9HB71 228 aaKnown RBP2.3□□□□□ -2.04
RGPD1-203ENST00000428128 OR5AC2Q9NZP5 309 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 TNFSF18Q9UNG2 199 aa2.3□□□□□ -2.04
RGPD1-203ENST00000428128 LY6G6EA0A0G2JKS1 128 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 IGHV1-69-2A0A0G2JMI3 117 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 J3QQQ9 107 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 PEX7O00628 323 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 MYL12BO14950 172 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 IFNA7P01567 189 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 RBMY1CP0DJD4 496 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 CRYGSP22914 178 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 SPRP35270 261 aaPredicted RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 GFERP55789 205 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 EIF3IQ13347 325 aaKnown RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 AMTNQ6UX39 209 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 C10orf111Q8N326 155 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 KBTBD8Q8NFY9 601 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 PP6455Q8WZ26 134 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 HSD17B10Q99714 261 aaKnown RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 F8P00451 2351 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 TRAV8-1A0A0A6YYK1 113 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 LOC100130705A0A1B0GUX0 176 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 TMEM212A6NML5 194 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 CD300LBA8K4G0 201 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 K7EPK0 472 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 KALRNO60229 2985 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 TNFP01375 233 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 GPX1P07203 203 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 SLC2A5P22732 501 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 PPIBP23284 216 aaKnown RBP2.29□□□□□ -2.04
RGPD1-203ENST00000428128 PSMB2P49721 201 aa2.29□□□□□ -2.04
RGPD1-203ENST00000428128 ZNF493Q6ZR52 646 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms