RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 CRYGCP07315 174 aa17.32■□□□□ 0.36
CNEP1R1-202ENST00000427478 OR5G3P0C626 314 aa17.32■□□□□ 0.36
CNEP1R1-202ENST00000427478 NPPCP23582 126 aa17.32■□□□□ 0.36
CNEP1R1-202ENST00000427478 TMEM37Q8WXS4 190 aa17.32■□□□□ 0.36
CNEP1R1-202ENST00000427478 MLXQ9UH92 298 aa17.32■□□□□ 0.36
CNEP1R1-202ENST00000427478 YTHDF2Q9Y5A9 579 aaKnown RBP17.32■□□□□ 0.36
CNEP1R1-202ENST00000427478 DOPEY1Q5JWR5 2465 aa17.31■□□□□ 0.36
CNEP1R1-202ENST00000427478 B4DEV8 164 aa17.31■□□□□ 0.36
CNEP1R1-202ENST00000427478 CORTO00230 105 aa17.31■□□□□ 0.36
CNEP1R1-202ENST00000427478 PDE6DO43924 150 aa17.31■□□□□ 0.36
CNEP1R1-202ENST00000427478 UBE2E1P51965 193 aa17.31■□□□□ 0.36
CNEP1R1-202ENST00000427478 TMEM241Q24JQ0 296 aa17.31■□□□□ 0.36
CNEP1R1-202ENST00000427478 DOK5Q9P104 306 aa17.31■□□□□ 0.36
CNEP1R1-202ENST00000427478 MT-ND4LP03901 98 aa17.3■□□□□ 0.36
CNEP1R1-202ENST00000427478 ADIRFQ15847 76 aa17.3■□□□□ 0.36
CNEP1R1-202ENST00000427478 C5orf64Q2M2E5 130 aa17.3■□□□□ 0.36
CNEP1R1-202ENST00000427478 FAM103A1Q9BTL3 118 aaKnown RBP17.3■□□□□ 0.36
CNEP1R1-202ENST00000427478 C19orf24Q9BVV8 132 aa17.3■□□□□ 0.36
CNEP1R1-202ENST00000427478 TECRQ9NZ01 308 aaKnown RBP17.3■□□□□ 0.36
CNEP1R1-202ENST00000427478 TBL2Q9Y4P3 447 aaKnown RBP17.3■□□□□ 0.36
CNEP1R1-202ENST00000427478 PSMB11A5LHX3 300 aa17.3■□□□□ 0.36
CNEP1R1-202ENST00000427478 ATP5J2P56134 94 aa17.3■□□□□ 0.36
CNEP1R1-202ENST00000427478 FXYD3Q14802 87 aa17.3■□□□□ 0.36
CNEP1R1-202ENST00000427478 C22orf15Q8WYQ4 148 aa17.3■□□□□ 0.36
CNEP1R1-202ENST00000427478 IGHV4-61A0A0C4DH41 118 aa17.29■□□□□ 0.36
CNEP1R1-202ENST00000427478 C10orf105Q8TEF2 133 aa17.29■□□□□ 0.36
CNEP1R1-202ENST00000427478 SRSF8Q9BRL6 282 aaKnown RBP17.29■□□□□ 0.36
CNEP1R1-202ENST00000427478 MED13LQ71F56 2210 aa17.29■□□□□ 0.36
CNEP1R1-202ENST00000427478 FLNCQ14315 2725 aa17.29■□□□□ 0.36
CNEP1R1-202ENST00000427478 NCBP2LA6PVI3 153 aaKnown RBP17.29■□□□□ 0.36
CNEP1R1-202ENST00000427478 F6UZH7 168 aa17.29■□□□□ 0.36
CNEP1R1-202ENST00000427478 OR7C2O60412 319 aa17.29■□□□□ 0.36
CNEP1R1-202ENST00000427478 CLN5O75503 358 aa17.29■□□□□ 0.36
CNEP1R1-202ENST00000427478 YPEL4Q96NS1 127 aa17.29■□□□□ 0.36
CNEP1R1-202ENST00000427478 WNT10AQ9GZT5 417 aa17.29■□□□□ 0.36
CNEP1R1-202ENST00000427478 TNFRSF19Q9NS68 423 aa17.29■□□□□ 0.36
CNEP1R1-202ENST00000427478 COX7A2P2O60397 106 aa17.28■□□□□ 0.36
CNEP1R1-202ENST00000427478 TMEM11P17152 192 aa17.28■□□□□ 0.36
CNEP1R1-202ENST00000427478 SAA4P35542 130 aa17.28■□□□□ 0.36
CNEP1R1-202ENST00000427478 RPL23P62829 140 aaKnown RBP17.28■□□□□ 0.36
CNEP1R1-202ENST00000427478 ZNF343Q6P1L6 599 aa17.28■□□□□ 0.36
CNEP1R1-202ENST00000427478 CLEC2AQ6UVW9 174 aa17.28■□□□□ 0.36
CNEP1R1-202ENST00000427478 Q8N6K4 173 aa17.28■□□□□ 0.36
CNEP1R1-202ENST00000427478 OR4X1Q8NH49 305 aa17.28■□□□□ 0.36
CNEP1R1-202ENST00000427478 ZNF503Q96F45 646 aa17.28■□□□□ 0.36
CNEP1R1-202ENST00000427478 DNAJC4Q9NNZ3 241 aa17.28■□□□□ 0.36
CNEP1R1-202ENST00000427478 SPTAN1Q13813 2472 aaKnown RBP17.28■□□□□ 0.36
CNEP1R1-202ENST00000427478 USP9XQ93008 2570 aaPredicted RBP17.28■□□□□ 0.36
CNEP1R1-202ENST00000427478 NDUFB4O95168 129 aa17.27■□□□□ 0.36
CNEP1R1-202ENST00000427478 TAS2R45P59539 299 aa17.27■□□□□ 0.36
CNEP1R1-202ENST00000427478 SELENOTP62341 195 aa17.27■□□□□ 0.36
CNEP1R1-202ENST00000427478 MORN5Q5VZ52 161 aa17.27■□□□□ 0.36
CNEP1R1-202ENST00000427478 MALSU1Q96EH3 234 aa17.27■□□□□ 0.36
CNEP1R1-202ENST00000427478 TXNDC17Q9BRA2 123 aa17.27■□□□□ 0.36
CNEP1R1-202ENST00000427478 DERL1Q9BUN8 251 aa17.27■□□□□ 0.36
CNEP1R1-202ENST00000427478 MRPL32Q9BYC8 188 aaKnown RBP17.27■□□□□ 0.36
CNEP1R1-202ENST00000427478 URGCP-MRPS24S4R325 110 aa17.27■□□□□ 0.36
CNEP1R1-202ENST00000427478 SCO2A0A1W2PP80 73 aa17.27■□□□□ 0.35
CNEP1R1-202ENST00000427478 RNF212Q495C1 297 aa17.27■□□□□ 0.35
CNEP1R1-202ENST00000427478 TMEM116Q8NCL8 245 aa17.27■□□□□ 0.35
CNEP1R1-202ENST00000427478 AJUBAQ96IF1 538 aa17.27■□□□□ 0.35
CNEP1R1-202ENST00000427478 C8orf88P0DMB2 117 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 FOLR2P14207 255 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 CTRB1P17538 263 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 RAB5AP20339 215 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 FLI1Q01543 452 aaPredicted RBP17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 EBI3Q14213 229 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 C10orf113Q5VZT2 155 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 CTRB2Q6GPI1 263 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 PQLC2Q6ZP29 291 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 ZFP82Q8N141 532 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 OR1L4Q8NGR5 311 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 PERPQ96FX8 193 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 PFDN5Q99471 154 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 TMEM167BQ9NRX6 74 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 ABCA2Q9BZC7 2435 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 TRAV5A0A0B4J249 113 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 OR10J4P0C629 311 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 BPIFB3P59826 476 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 FAM120AOSQ5T036 256 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 NRGNQ92686 78 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 UHRF2Q96PU4 802 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 RNF2Q99496 336 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 TRGV9Q99603 122 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 SLC25A2Q9BXI2 301 aa17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 GSX1Q9H4S2 264 aaPredicted RBP17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 POLR3KQ9Y2Y1 108 aaPredicted RBP17.26■□□□□ 0.35
CNEP1R1-202ENST00000427478 VWC2LB2RUY7 222 aa17.25■□□□□ 0.35
CNEP1R1-202ENST00000427478 NDUFS8O00217 210 aa17.25■□□□□ 0.35
CNEP1R1-202ENST00000427478 PATE2Q6UY27 113 aa17.25■□□□□ 0.35
CNEP1R1-202ENST00000427478 IGHV4-30-2A0A087WSY4 118 aa17.24■□□□□ 0.35
CNEP1R1-202ENST00000427478 CXorf65A6NEN9 183 aa17.24■□□□□ 0.35
CNEP1R1-202ENST00000427478 I3L2K1 104 aa17.24■□□□□ 0.35
CNEP1R1-202ENST00000427478 ELOBQ15370 118 aa17.24■□□□□ 0.35
CNEP1R1-202ENST00000427478 Q8WTZ3 238 aa17.24■□□□□ 0.35
CNEP1R1-202ENST00000427478 ARPC1AQ92747 370 aa17.24■□□□□ 0.35
CNEP1R1-202ENST00000427478 SSX3Q99909 188 aa17.24■□□□□ 0.35
CNEP1R1-202ENST00000427478 NPFFO15130 113 aa17.24■□□□□ 0.35
CNEP1R1-202ENST00000427478 CX3CL1P78423 397 aa17.24■□□□□ 0.35
CNEP1R1-202ENST00000427478 NDPQ00604 133 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms