RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 ETV6P41212 452 aa7.32□□□□□ -1.24
GACAT3-201ENST00000426539 NPBWR1P48145 328 aa7.32□□□□□ -1.24
GACAT3-201ENST00000426539 SP6Q3SY56 376 aa7.32□□□□□ -1.24
GACAT3-201ENST00000426539 Q6ZRM9 215 aa7.32□□□□□ -1.24
GACAT3-201ENST00000426539 OR4D10Q8NGI6 311 aa7.32□□□□□ -1.24
GACAT3-201ENST00000426539 OR52I2Q8NH67 350 aa7.32□□□□□ -1.24
GACAT3-201ENST00000426539 C11orf45Q8TAV5 145 aa7.32□□□□□ -1.24
GACAT3-201ENST00000426539 ZNF486Q96H40 463 aaPredicted RBP7.32□□□□□ -1.24
GACAT3-201ENST00000426539 GINS3Q9BRX5 216 aa7.32□□□□□ -1.24
GACAT3-201ENST00000426539 NAA50Q9GZZ1 169 aaKnown RBP7.32□□□□□ -1.24
GACAT3-201ENST00000426539 FBXL17Q9UF56 701 aa7.32□□□□□ -1.24
GACAT3-201ENST00000426539 C3orf85A0A1B0GTC6 90 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 K7EQG2 157 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 CLN5O75503 358 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 TNFAIP8O95379 198 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 CD5P06127 495 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 H2AFB1P0C5Y9 115 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 H2AFB2P0C5Z0 115 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 SNCAP37840 140 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 PPP5CP53041 499 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 PAFAH1B2P68402 229 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 BSXQ3C1V8 233 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 RNASE10Q5GAN6 216 aaKnown RBP7.31□□□□□ -1.24
GACAT3-201ENST00000426539 ARRDC1Q8N5I2 433 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 SLC35G3Q8N808 338 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 Q8NAQ8 132 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 ABHD1Q96SE0 405 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 VCX3AQ9NNX9 186 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 MTFP1Q9UDX5 166 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 FRAS1Q86XX4 4008 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 HERC2O95714 4834 aa7.31□□□□□ -1.24
GACAT3-201ENST00000426539 FAM25AB3EWG3 89 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 FAM25CB3EWG5 89 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 FAM25GB3EWG6 89 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 DNASE2O00115 360 aaPredicted RBP7.3□□□□□ -1.24
GACAT3-201ENST00000426539 IFNA17P01571 189 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 IGKV1-17P01599 117 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 CD74P04233 296 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 RBMY1A1P0DJD3 496 aaKnown RBP7.3□□□□□ -1.24
GACAT3-201ENST00000426539 RBMY1CP0DJD4 496 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 C4BPBP20851 252 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 UCP1P25874 307 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 CRYBB3P26998 211 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 RORCP51449 518 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 AKR1C2P52895 323 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 RPL11P62913 178 aaKnown RBP7.3□□□□□ -1.24
GACAT3-201ENST00000426539 TMEM187Q14656 261 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 RBMY1FQ15415 496 aaKnown RBP7.3□□□□□ -1.24
GACAT3-201ENST00000426539 RBMS2Q15434 407 aaKnown RBP7.3□□□□□ -1.24
GACAT3-201ENST00000426539 CTF1Q16619 201 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 AARDQ4LEZ3 155 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 TRPT1Q86TN4 253 aaKnown RBP7.3□□□□□ -1.24
GACAT3-201ENST00000426539 OR13C8Q8NGS7 320 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 OR4X1Q8NH49 305 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 MFFQ9GZY8 342 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 RABAC1Q9UI14 185 aa7.3□□□□□ -1.24
GACAT3-201ENST00000426539 DNAH10Q8IVF4 4471 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 KNCNA6PVL3 124 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 CORTO00230 105 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 NPPCP23582 126 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 OPRK1P41145 380 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 RPL5P46777 297 aaKnown RBP7.29□□□□□ -1.24
GACAT3-201ENST00000426539 P2RY1P47900 373 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 HOXA1P49639 335 aaPredicted RBP7.29□□□□□ -1.24
GACAT3-201ENST00000426539 TRIM16LQ309B1 348 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 TIGITQ495A1 244 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 TERB2Q8NHR7 220 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 LHFPL5Q8TAF8 219 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 DCANP1Q8TF63 244 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 EXTL2Q9UBQ6 330 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 APLNQ9ULZ1 77 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 U3KQE9 123 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 X6R8D5 127 aa7.29□□□□□ -1.24
GACAT3-201ENST00000426539 IGHV4-28A0A0C4DH34 117 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 ATG12O94817 140 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 GABARAPO95166 117 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 CDS2O95674 445 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 IFNA4P05014 189 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 OR5AC1P0C628 307 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 ZNF688P0C7X2 276 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 IGLC1P0CG04 106 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 SMIM18P0DKX4 95 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 ZNF182P17025 639 aaPredicted RBP7.28□□□□□ -1.24
GACAT3-201ENST00000426539 TBPP20226 339 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 SUB1P53999 127 aaKnown RBP eCLIP7.28□□□□□ -1.24
GACAT3-201ENST00000426539 FAAP20Q6NZ36 180 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 MZT2AQ6P582 158 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 STHQ8IWL8 128 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 TMEM229BQ8NBD8 167 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 STXBP6Q8NFX7 210 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 MARCH1Q8TCQ1 289 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 C2CD4CQ8TF44 421 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 GLYATL2Q8WU03 294 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 TMEM170AQ8WVE7 144 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 GRAMD2BQ96HH9 432 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 METTL26Q96S19 204 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 RTBDNQ9BSG5 229 aaPredicted RBP7.28□□□□□ -1.24
GACAT3-201ENST00000426539 PDCD10Q9BUL8 212 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 MIXL1Q9H2W2 232 aa7.28□□□□□ -1.24
GACAT3-201ENST00000426539 TMEM231Q9H6L2 316 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms