RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, human

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL12A1-205	ENST00000425443	VDAC2	P45880	294 aa	Predicted RBP	10.63	□□□□□ -0.71
COL12A1-205	ENST00000425443	ARF6	P62330	175 aa		10.63	□□□□□ -0.71
COL12A1-205	ENST00000425443	ASPHD1	Q5U4P2	390 aa		10.63	□□□□□ -0.71
COL12A1-205	ENST00000425443	MRPL52	Q86TS9	123 aa	Known RBP	10.63	□□□□□ -0.71
COL12A1-205	ENST00000425443	OR8I2	Q8N0Y5	310 aa		10.63	□□□□□ -0.71
COL12A1-205	ENST00000425443	OCC1	Q8TAD7	63 aa		10.63	□□□□□ -0.71
COL12A1-205	ENST00000425443	LRFN3	Q9BTN0	628 aa		10.63	□□□□□ -0.71
COL12A1-205	ENST00000425443	MUC6	Q6W4X9	2439 aa		10.63	□□□□□ -0.71
COL12A1-205	ENST00000425443	FBLL1	A6NHQ2	334 aa	Known RBP	10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	SLC17A3	O00476	420 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	C17orf58	Q2M2W7	97 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	PRR31	Q5SQ13	230 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	ABHD17A	Q96GS6	310 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	MED13L	Q71F56	2210 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443		F2Z2F3	143 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	GFRA3	O60609	400 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	IGHV3-48	P01763	117 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	RELB	Q01201	579 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	OR4P4	Q8NGL7	312 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	FAM103A1	Q9BTL3	118 aa	Known RBP	10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	PGPEP1	Q9NXJ5	209 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	FAM90A9P	A6NNJ1	464 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	PDE6D	O43924	150 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	CRYGC	P07315	174 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	TNFRSF1A	P19438	455 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	AZU1	P20160	251 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	CR1L	Q2VPA4	569 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	C3orf36	Q3SXR2	165 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	GFRAL	Q6UXV0	394 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	KCNIP2	Q9NS61	270 aa		10.62	□□□□□ -0.71
COL12A1-205	ENST00000425443	TRAV30	A0A087WSZ9	112 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	GATA4	P43694	442 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	REG1B	P48304	166 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	MLANA	Q16655	118 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	KCNIP4	Q6PIL6	250 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	IDI2-AS1	Q9NZ38	188 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	SMPX	Q9UHP9	88 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	MDFIC2	A0A1B0GVS7	189 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443		A4D1N5	150 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	PPIAL4G	P0DN37	164 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	CBLN1	P23435	193 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	SLC35B1	P78383	322 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	STUM	Q69YW2	141 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	ZC2HC1A	Q96GY0	325 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	GAFA1	Q96PS6	74 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	VAMP8	Q9BV40	100 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	LAMTOR2	Q9Y2Q5	125 aa		10.61	□□□□□ -0.71
COL12A1-205	ENST00000425443	DYSF	O75923	2080 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	hADV38S2	A0JD32	116 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	MPDU1	O75352	247 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	CA2	P00918	260 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	IGFBP2	P18065	325 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	NPY1R	P25929	384 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	LCN2	P80188	198 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	NIT1	Q86X76	327 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	DOLPP1	Q86YN1	238 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	OR52E5	Q8NH55	327 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	RAB1C	Q92928	201 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	ADTRP	Q96IZ2	230 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	MS4A10	Q96PG2	267 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443		A0A0G2JNJ9	132 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	IGKV1-16	P04430	117 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	OR10J4	P0C629	311 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	OPRK1	P41145	380 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443		Q6ZN92	141 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	STPG3	Q8N7X2	389 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	H1FX	Q92522	213 aa	Known RBP	10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443		Q9UFV3	132 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	GAGE12B	A1L429	117 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	HSPE1	P61604	102 aa	Known RBP	10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	FOXL1	Q12952	345 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	RTL8B	Q17RB0	113 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	PRSS33	Q8NF86	280 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	CCL17	Q92583	94 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	NPVF	Q9HCQ7	196 aa		10.6	□□□□□ -0.71
COL12A1-205	ENST00000425443	C15orf61	A6NNL5	157 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	RPL31	P62899	125 aa	Known RBP	10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	VN1R17P	Q8TDU5	208 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	OR51B2	Q9Y5P1	312 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	CUL9	Q8IWT3	2517 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	SVEP1	Q4LDE5	3571 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	PPIAL4E	A0A075B759	164 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	PPIAL4C	A0A0B4J2A2	164 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	PPIAL4D	F5H284	164 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	PPIAL4F	P0DN26	164 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	HNRNPA3	P51991	378 aa	Known RBP	10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	BSPH1	Q075Z2	132 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	EFNB3	Q15768	340 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	C5orf64	Q2M2E5	130 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	ZNF788	Q6ZQV5	615 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	SAP30L	Q9HAJ7	183 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	LSM4	Q9Y4Z0	139 aa	Known RBP	10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	RNF114	Q9Y508	228 aa		10.59	□□□□□ -0.71
COL12A1-205	ENST00000425443	LRBA	P50851	2863 aa		10.58	□□□□□ -0.71
COL12A1-205	ENST00000425443	CGB3	P0DN86	165 aa		10.58	□□□□□ -0.72
COL12A1-205	ENST00000425443	CGB7	P0DN87	165 aa		10.58	□□□□□ -0.72
COL12A1-205	ENST00000425443	CD99	P14209	185 aa		10.58	□□□□□ -0.72
COL12A1-205	ENST00000425443	PRB3	Q04118	309 aa	Predicted RBP	10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms