RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 IAPPP10997 89 aa8.15□□□□□ -1.1
USP54-205ENST00000424265 UFSP1Q6NVU6 142 aa8.15□□□□□ -1.1
USP54-205ENST00000424265 A0A1W2PP11 408 aa8.15□□□□□ -1.11
USP54-205ENST00000424265 FABP5P3A8MUU1 101 aa8.15□□□□□ -1.11
USP54-205ENST00000424265 TMEM262E9PQX1 116 aa8.15□□□□□ -1.11
USP54-205ENST00000424265 SLC35B1P78383 322 aa8.15□□□□□ -1.11
USP54-205ENST00000424265 SGK494Q96LW2 274 aa8.15□□□□□ -1.11
USP54-205ENST00000424265 CCL1P22362 96 aa8.15□□□□□ -1.11
USP54-205ENST00000424265 C1orf100Q5SVJ3 147 aa8.15□□□□□ -1.11
USP54-205ENST00000424265 HAPLN4Q86UW8 402 aa8.15□□□□□ -1.11
USP54-205ENST00000424265 OR4X2Q8NGF9 303 aa8.15□□□□□ -1.11
USP54-205ENST00000424265 KLF14Q8TD94 323 aaPredicted RBP8.15□□□□□ -1.11
USP54-205ENST00000424265 ARPC1AQ92747 370 aa8.15□□□□□ -1.11
USP54-205ENST00000424265 NABP1Q96AH0 204 aa8.15□□□□□ -1.11
USP54-205ENST00000424265 SDK2Q58EX2 2172 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 IGKV1D-43A0A0B4J1Z2 117 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 C3orf85A0A1B0GTC6 90 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 EDDM3BP56851 147 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 FAM27E3Q08E93 113 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 MLNRO43193 412 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 CXorf1O96002 111 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 IFITM1P13164 125 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 VDAC2P45880 294 aaPredicted RBP8.14□□□□□ -1.11
USP54-205ENST00000424265 ERVK-16P61578 105 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 C18orf32Q8TCD1 76 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 FHL1Q13642 323 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 TIGITQ495A1 244 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 STPG3Q8N7X2 389 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 OR5AN1Q8NGI8 311 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 NEU4Q8WWR8 484 aaPredicted RBP8.14□□□□□ -1.11
USP54-205ENST00000424265 H1FXQ92522 213 aaKnown RBP8.14□□□□□ -1.11
USP54-205ENST00000424265 DUX5Q96PT3 197 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 CSDC2Q9Y534 153 aaKnown RBP8.14□□□□□ -1.11
USP54-205ENST00000424265 SAA2-SAA4A0A096LPE2 208 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 A0A0G2JNJ9 132 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 TECRQ9NZ01 308 aaKnown RBP8.14□□□□□ -1.11
USP54-205ENST00000424265 Q9UFV3 132 aa8.14□□□□□ -1.11
USP54-205ENST00000424265 HEATR5AQ86XA9 2040 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 H0YJW9 148 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 FCER1GP30273 86 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 RTL8BQ17RB0 113 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 ABHD14BQ96IU4 210 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 SPACA5Q96QH8 159 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
USP54-205ENST00000424265 RP1L1Q8IWN7 2480 aaPredicted RBP8.13□□□□□ -1.11
USP54-205ENST00000424265 IQCF6A8MYZ5 107 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 SPRY1O43609 319 aaPredicted RBP8.13□□□□□ -1.11
USP54-205ENST00000424265 EGR1P18146 543 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 CRYGSP22914 178 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 CXorf66Q5JRM2 361 aaPredicted RBP8.13□□□□□ -1.11
USP54-205ENST00000424265 SPANXN5Q5MJ07 72 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 OR5P3Q8WZ94 311 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 HTTP42858 3142 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 OR9G9P0C7N8 305 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 TMEM30BQ3MIR4 351 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 SPAG8Q99932 426 aaPredicted RBP8.13□□□□□ -1.11
USP54-205ENST00000424265 OR5AL1P0C617 328 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 PRTN3P24158 256 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 KLRD1Q13241 179 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 TM4SF20Q53R12 229 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 FAM90A1Q86YD7 464 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 LRTM2Q8N967 370 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 VGLL1Q99990 258 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 VSIRQ9H7M9 311 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 SLC25A15Q9Y619 301 aa8.13□□□□□ -1.11
USP54-205ENST00000424265 BRI3O95415 125 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 NUP37Q8NFH4 326 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 IL1F10Q8WWZ1 152 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 F11RQ9Y624 299 aaKnown RBP8.12□□□□□ -1.11
USP54-205ENST00000424265 FNDC10F2Z333 226 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 NMUP48645 174 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 TRBV20-1A0A075B6N2 111 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 TNFRSF6BO95407 300 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 LGALS4P56470 323 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 SLC38A11Q08AI6 406 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 SH2D6Q7Z4S9 175 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 RDH5Q92781 318 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 RCHY1Q96PM5 261 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 SMIM9A6NGZ8 99 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 FOXF2Q12947 444 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 TNXAQ16473 311 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 JMJD8Q96S16 334 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 ONECUT1Q9UBC0 465 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 FZR1Q9UM11 496 aa8.12□□□□□ -1.11
USP54-205ENST00000424265 MT-ATP8P03928 68 aa8.11□□□□□ -1.11
USP54-205ENST00000424265 FGF12P61328 243 aa8.11□□□□□ -1.11
USP54-205ENST00000424265 EDDM3AQ14507 147 aa8.11□□□□□ -1.11
USP54-205ENST00000424265 LYRM7Q5U5X0 104 aa8.11□□□□□ -1.11
USP54-205ENST00000424265 PLEKHA3Q9HB20 300 aa8.11□□□□□ -1.11
USP54-205ENST00000424265 GCM1Q9NP62 436 aa8.11□□□□□ -1.11
USP54-205ENST00000424265 MBNL2Q5VZF2 373 aaKnown RBP8.11□□□□□ -1.11
USP54-205ENST00000424265 MOGAT3Q86VF5 341 aa8.11□□□□□ -1.11
USP54-205ENST00000424265 SSC4DQ8WTU2 575 aa8.11□□□□□ -1.11
USP54-205ENST00000424265 SRSF1Q07955 248 aaKnown RBP eCLIP8.11□□□□□ -1.11
USP54-205ENST00000424265 ASCL4Q6XD76 172 aa8.11□□□□□ -1.11
USP54-205ENST00000424265 CENPVQ7Z7K6 275 aaPredicted RBP8.11□□□□□ -1.11
USP54-205ENST00000424265 C10orf126Q8N4M7 172 aa8.11□□□□□ -1.11
USP54-205ENST00000424265 Q8N976 141 aa8.11□□□□□ -1.11
USP54-205ENST00000424265 CCL17Q92583 94 aa8.11□□□□□ -1.11
USP54-205ENST00000424265 GVINP1Q7Z2Y8 2422 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms