RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ZNF497Q6ZNH5 498 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 LINC01551Q86U37 167 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 UNC13CQ8NB66 2214 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 LINC00271P0C7V0 271 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 PSG1P11464 419 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 ADCYAP1P18509 176 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 PPIFP30405 207 aaKnown RBP10.31□□□□□ -0.76
CLCN4-203ENST00000421085 OR9G4Q8NGQ1 327 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 ZNF319Q9P2F9 582 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 PSG8Q9UQ74 426 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 WDR83OSQ9Y284 106 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 FTH1P19P0C7X4 201 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 ATP1A1-AS1Q5TC04 95 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 TRAV1-1A0A0B4J248 108 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 TDGF1P3P51864 188 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 GTF3AQ92664 365 aaKnown RBP10.31□□□□□ -0.76
CLCN4-203ENST00000421085 TCRBV4S1A1TA0A5B7 111 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 CLEC19AQ6UXS0 136 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 GTSCR1Q86UQ5 136 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 SAP25Q8TEE9 199 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 RNF115Q9Y4L5 304 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 UMODP07911 640 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 GLRXP35754 106 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 GUSBP1Q15486 140 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 ATAD5Q96QE3 1844 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 TRAV5A0A0B4J249 113 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 EREGO14944 169 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 C3orf79P0CE67 100 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 PRTN3P24158 256 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 MST1P26927 711 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 TMPRSS3P57727 454 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 HGFACQ04756 655 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 BCL6BQ8N143 479 aaPredicted RBP10.3□□□□□ -0.76
CLCN4-203ENST00000421085 KIR3DL3Q8N743 410 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 WBP1Q96G27 269 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 ADAMTS7Q9UKP4 1686 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 ARPC1AQ92747 370 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 ASCL2Q99929 193 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 C11orf68Q9H3H3 251 aaKnown RBP10.3□□□□□ -0.76
CLCN4-203ENST00000421085 NHSL1Q5SYE7 1610 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 PRB4P10163 310 aaPredicted RBP10.3□□□□□ -0.76
CLCN4-203ENST00000421085 NRN1LQ496H8 165 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 LHFPL1Q86WI0 220 aa10.3□□□□□ -0.76
CLCN4-203ENST00000421085 PPBPP02775 128 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 CD33P20138 364 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 TMEM155Q4W5P6 130 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 RNF182Q8N6D2 247 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 TFF1P04155 84 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 IFI27P40305 119 aaPredicted RBP10.29□□□□□ -0.76
CLCN4-203ENST00000421085 MORN2Q502X0 79 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 SIGLEC12Q96PQ1 595 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 DPM3Q9P2X0 92 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 MDC1Q14676 2089 aaKnown RBP10.29□□□□□ -0.76
CLCN4-203ENST00000421085 YPEL1O60688 119 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 CELA3BP08861 270 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 YPEL2Q96QA6 119 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 SPATA31B1PQ5VZV4 182 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 TREML4Q6UXN2 200 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 PPP1R27Q86WC6 154 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 ASXL3Q9C0F0 2248 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 PAX1P15863 534 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 LHFPL4Q7Z7J7 247 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 RGPD3A6NKT7 1758 aaPredicted RBP10.29□□□□□ -0.76
CLCN4-203ENST00000421085 RGPD4Q7Z3J3 1758 aa10.29□□□□□ -0.76
CLCN4-203ENST00000421085 HEATR5BQ9P2D3 2071 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 IQCF6A8MYZ5 107 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 CD300EQ496F6 205 aaPredicted RBP10.28□□□□□ -0.76
CLCN4-203ENST00000421085 SNRNP200O75643 2136 aaKnown RBP10.28□□□□□ -0.76
CLCN4-203ENST00000421085 PLXNB2O15031 1838 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 A0A0G2JMM0 328 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 A0A1W2PPB8 328 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 KIR3DP1A8MWS1 328 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 SRSF6Q13247 344 aaKnown RBP10.28□□□□□ -0.76
CLCN4-203ENST00000421085 GAGE12BA1L429 117 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 FOXH1O75593 365 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 ORMDL2Q53FV1 153 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 SLC25A15Q9Y619 301 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 PPP1R32Q7Z5V6 425 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 RPP25LQ8N5L8 163 aaKnown RBP10.28□□□□□ -0.76
CLCN4-203ENST00000421085 GLMPQ8WWB7 406 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 COL11A1P12107 1806 aaPredicted RBP10.28□□□□□ -0.76
CLCN4-203ENST00000421085 MRPL52Q86TS9 123 aaKnown RBP10.28□□□□□ -0.76
CLCN4-203ENST00000421085 ERG28Q9UKR5 140 aa10.28□□□□□ -0.76
CLCN4-203ENST00000421085 IGHV3-64A0A075B6Q5 118 aa10.27□□□□□ -0.76
CLCN4-203ENST00000421085 RNF125Q96EQ8 232 aa10.27□□□□□ -0.76
CLCN4-203ENST00000421085 LINC00312Q9Y6C7 94 aa10.27□□□□□ -0.76
CLCN4-203ENST00000421085 BMPERQ8N8U9 685 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 GGTLC1Q9BX51 225 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 YAE1D1Q9NRH1 226 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 IGHV2OR16-5A0A0B4J2B6 119 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 AGMATQ9BSE5 352 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 ZNF236Q9UL36 1845 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 B9A039 149 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 PLNP26678 52 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 FXYD7P58549 80 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 LSM4Q9Y4Z0 139 aaKnown RBP10.27□□□□□ -0.77
CLCN4-203ENST00000421085 COL24A1Q17RW2 1714 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 TRAV21A0A0B4J279 112 aa10.27□□□□□ -0.77
CLCN4-203ENST00000421085 A8MWP6 167 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms