RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 FBXL15Q9H469 300 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 TRBV9A0A0B4J1U6 114 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 SS18L1O75177 396 aaPredicted RBP10.79□□□□□ -0.68
SCN1B-202ENST00000415950 SMIM13P0DJ93 91 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 AMMECR1LQ6DCA0 310 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 NABP1Q96AH0 204 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 PRELID3AQ96N28 172 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 GPR82Q96P67 336 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 ACACBO00763 2458 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 H3BUT2 72 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 IGHV2-70P01814 119 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 LCN12Q6JVE5 192 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 EBLN2Q6P2I7 272 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 PPP1R32Q7Z5V6 425 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 OR9G1Q8NH87 305 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 RNF166Q96A37 237 aaPredicted RBP10.79□□□□□ -0.68
SCN1B-202ENST00000415950 TRBV24-1A0A075B6N3 115 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 HIGD1CA8MV81 97 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 IGKV1-5P01602 117 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 ID1P41134 155 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 C1orf185Q5T7R7 199 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 C20orf204Q6ZNR8 217 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 DENND4CQ5VZ89 1909 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 LAMA2P24043 3122 aaKnown RBP10.78□□□□□ -0.68
SCN1B-202ENST00000415950 UMODP07911 640 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 KLRB1Q12918 225 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 ANAPC1Q9H1A4 1944 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 NMSQ5H8A3 153 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 WDR82Q6UXN9 313 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 SFXN3Q9BWM7 321 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 IFI27L2Q9H2X8 130 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 MRPL16Q9NX20 251 aaKnown RBP10.78□□□□□ -0.68
SCN1B-202ENST00000415950 SPCS1Q9Y6A9 102 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 A0A1B0GUT8 65 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 PEX7O00628 323 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 ZNF146Q15072 292 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 FAM90A2PQ658T7 463 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 ALKBH7Q9BT30 221 aaPredicted RBP10.78□□□□□ -0.68
SCN1B-202ENST00000415950 C1QTNF5Q9BXJ0 243 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 PCNX3Q9H6A9 2034 aa10.78□□□□□ -0.68
SCN1B-202ENST00000415950 NPIPB6E9PJ23 425 aa10.77□□□□□ -0.68
SCN1B-202ENST00000415950 IFNL4K9M1U5 179 aa10.77□□□□□ -0.68
SCN1B-202ENST00000415950 TTC9CQ8N5M4 171 aa10.77□□□□□ -0.68
SCN1B-202ENST00000415950 LRTM2Q8N967 370 aa10.77□□□□□ -0.68
SCN1B-202ENST00000415950 DDB2Q92466 427 aa10.77□□□□□ -0.68
SCN1B-202ENST00000415950 NAA38Q9BRA0 125 aaKnown RBP10.77□□□□□ -0.68
SCN1B-202ENST00000415950 AHRRA9YTQ3 701 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 FAM106CPP0CH98 169 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 GNG5P63218 68 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 HIST1H1AQ02539 215 aaPredicted RBP10.77□□□□□ -0.69
SCN1B-202ENST00000415950 ZCCHC24Q8N2G6 241 aaKnown RBP10.77□□□□□ -0.69
SCN1B-202ENST00000415950 FADS6Q8N9I5 356 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 IMMP1LQ96LU5 166 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 FOXC2Q99958 501 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 PINLYPA6NC86 204 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 LINC00614P0C842 121 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 COX5BP10606 129 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 CRYGSP22914 178 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 ZNF56Q15929 161 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 MEIG1Q5JSS6 88 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 KIR3DL3Q8N743 410 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 PRR19A6NJB7 356 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 DNASE2BQ8WZ79 361 aa10.77□□□□□ -0.69
SCN1B-202ENST00000415950 DNM1P46Q6ZS02 220 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 OR52E5Q8NH55 327 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 FNDC4Q9H6D8 234 aaPredicted RBP10.76□□□□□ -0.69
SCN1B-202ENST00000415950 FOXA2Q9Y261 457 aaPredicted RBP10.76□□□□□ -0.69
SCN1B-202ENST00000415950 PLXNA3P51805 1871 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 CECR9P0C854 216 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 FAM27E3Q08E93 113 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 SPATA31B1PQ5VZV4 182 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 MCRIP2Q9BUT9 160 aaKnown RBP10.76□□□□□ -0.69
SCN1B-202ENST00000415950 CHODLQ9H9P2 273 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 PRDM6Q9NQX0 595 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 PSPNO60542 156 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 SELLP14151 372 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 CTSSP25774 331 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 LDLRAD2Q5SZI1 272 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 GTF3AQ92664 365 aaKnown RBP10.76□□□□□ -0.69
SCN1B-202ENST00000415950 C19orf24Q9BVV8 132 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 TIMP3P35625 211 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 ACP7Q6ZNF0 438 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 MRPL32Q9BYC8 188 aaKnown RBP10.76□□□□□ -0.69
SCN1B-202ENST00000415950 PLA2G2EQ9NZK7 142 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 SEMA5BQ9P283 1151 aa10.76□□□□□ -0.69
SCN1B-202ENST00000415950 IGHV2-5P01817 119 aa10.75□□□□□ -0.69
SCN1B-202ENST00000415950 PYYP10082 97 aa10.75□□□□□ -0.69
SCN1B-202ENST00000415950 SFTPCP11686 197 aa10.75□□□□□ -0.69
SCN1B-202ENST00000415950 MYOD1P15172 320 aa10.75□□□□□ -0.69
SCN1B-202ENST00000415950 NUTF2P61970 127 aaKnown RBP10.75□□□□□ -0.69
SCN1B-202ENST00000415950 MBD3L1Q8WWY6 194 aa10.75□□□□□ -0.69
SCN1B-202ENST00000415950 KIR2DL4Q99706 377 aa10.75□□□□□ -0.69
SCN1B-202ENST00000415950 NPPCP23582 126 aa10.75□□□□□ -0.69
SCN1B-202ENST00000415950 MRPL14Q6P1L8 145 aaKnown RBP10.75□□□□□ -0.69
SCN1B-202ENST00000415950 TEX38Q6PEX7 206 aa10.75□□□□□ -0.69
SCN1B-202ENST00000415950 GPR183P32249 361 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 LINC01551Q86U37 167 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 TMEM186Q96B77 213 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 GEMIN7Q9H840 131 aaKnown RBP10.74□□□□□ -0.69
SCN1B-202ENST00000415950 CCL3L1P16619 93 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms