RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 RAB3AP20336 220 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 DTYMKP23919 212 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 EIF1P41567 113 aaKnown RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 TAS2R43P59537 309 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 AESQ08117 197 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 FOXF1Q12946 379 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 SSX1Q16384 188 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 ZNF322Q6U7Q0 402 aaPredicted RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 FBXW12Q6X9E4 464 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 C18orf65Q6ZTR6 163 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 TCF23Q7RTU1 214 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 SLC36A1Q7Z2H8 476 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 NEGR1Q7Z3B1 354 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 LRRC18Q8N456 261 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 C11orf42Q8N5U0 333 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 Q8N9P0 234 aaPredicted RBP1.81□□□□□ -2.12
MCF2-204ENST00000414978 UBAC2Q8NBM4 344 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 OR2T4Q8NH00 348 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 MCFD2Q8NI22 146 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 S100ZQ8WXG8 99 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 AP3S1Q92572 193 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 TMEM203Q969S6 136 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 Q96M85 177 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 KCTD7Q96MP8 289 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 ZNF649Q9BS31 505 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 HMG20AQ9NP66 347 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 DKKL1Q9UK85 242 aa1.81□□□□□ -2.12
MCF2-204ENST00000414978 NIPBLQ6KC79 2804 aaeCLIP1.81□□□□□ -2.12
MCF2-204ENST00000414978 INTS1Q8N201 2190 aaKnown RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 IGLV3-32A0A0A0MS00 114 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 B4DEV8 164 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 CLDN25C9JDP6 229 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 ZNF670-ZNF695F2Z2N8 137 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 J3QLW9 94 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 ZNF19P17023 458 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 SPI1P17947 270 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 CELP19835 753 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 PSMB2P49721 201 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 DLX6P56179 175 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 ENDOGQ14249 297 aaKnown RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 ZNF846Q147U1 533 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 PLPPR5Q32ZL2 321 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 ZNF404Q494X3 552 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 MPV17L2Q567V2 206 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 HACD4Q5VWC8 232 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 SPATA31B1PQ5VZV4 182 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 C3orf33Q6P1S2 294 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 MRPL52Q86TS9 123 aaKnown RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 TMEM256Q8N2U0 113 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 OR2M3Q8NG83 312 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 OR2T27Q8NH04 317 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 MFSD8Q8NHS3 518 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 BORCS5Q969J3 196 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 PYGO2Q9BRQ0 406 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 C6orf62Q9GZU0 229 aaPredicted RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 MS4A6AQ9H2W1 248 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 MDFICQ9P1T7 246 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 SIGLEC9Q9Y336 463 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 CHCHD2Q9Y6H1 151 aaPredicted RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 USF3Q68DE3 2245 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 ACANP16112 2415 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 JMJD1CQ15652 2540 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 OR5H1A6NKK0 313 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 H7C1C5 153 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 J3QRE1 110 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 ZNF593O00488 134 aaPredicted RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 MMP7P09237 267 aaPredicted RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 CCL3P10147 92 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 FKBP2P26885 142 aaKnown RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 CD79BP40259 229 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 IDH3GP51553 393 aaPredicted RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 LCN6P62502 163 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 RPS25P62851 125 aaKnown RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 HBG1P69891 147 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 HBG2P69892 147 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 MESTQ5EB52 335 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 CENPWQ5EE01 88 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 GFI1BQ5VTD9 330 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 C11orf71Q6IPW1 123 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 LINC00299Q6ZSB3 139 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 HIST2H3AQ71DI3 136 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 ZNF584Q8IVC4 421 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 OR11L1Q8NGX0 322 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 TSPAN32Q96QS1 320 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 TTTY10Q9BZA0 68 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 TXNIPQ9H3M7 391 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 RHOFQ9HBH0 211 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 TXNL4BQ9NX01 149 aaKnown RBP1.8□□□□□ -2.12
MCF2-204ENST00000414978 GNG8Q9UK08 70 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 DNAH7Q8WXX0 4024 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 TRDV1A0A1B0GX56 115 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 CEACAM18A8MTB9 384 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 H0Y9J4 135 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 PHYHO14832 338 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 CDRT1O95170 752 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 INAFM2P0DMQ5 153 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 ATF1P18846 271 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 ORM2P19652 201 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 CRABP1P29762 137 aa1.8□□□□□ -2.12
MCF2-204ENST00000414978 AGTR1P30556 359 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 477.3 ms