RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TBC1D24Q9ULP9 559 aa8.74□□□□□ -1.01
LIMS2-210ENST00000413578 AGRNO00468 2067 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 DEFB131BA0A096LNP1 70 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 A0A0B4J293 547 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 LOC100506127A0A0U1RQW1 187 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 A0A1W2PS18 150 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 ZNF688P0C7X2 276 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 P0DMU3 169 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 FAM231AP0DMU4 169 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 FAM231CP0DMU5 169 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 RNASE2P10153 161 aaKnown RBP8.73□□□□□ -1.01
LIMS2-210ENST00000413578 NPPCP23582 126 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 P2RY1P47900 373 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 PPP5CP53041 499 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 IZUMO4Q1ZYL8 232 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 LGALS9BQ3B8N2 356 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 SPINK9Q5DT21 86 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 Q6ZR54 194 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 STXBP6Q8NFX7 210 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 S100A16Q96FQ6 103 aaKnown RBP8.73□□□□□ -1.01
LIMS2-210ENST00000413578 CLEC5AQ9NY25 188 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 U3KQE9 123 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 MUC4Q99102 2169 aa8.73□□□□□ -1.01
LIMS2-210ENST00000413578 CLN5O75503 358 aa8.72□□□□□ -1.01
LIMS2-210ENST00000413578 IGKV1-17P01599 117 aa8.72□□□□□ -1.01
LIMS2-210ENST00000413578 IGKV1-5P01602 117 aa8.72□□□□□ -1.01
LIMS2-210ENST00000413578 CD74P04233 296 aa8.72□□□□□ -1.01
LIMS2-210ENST00000413578 HLA-DMAP28067 261 aa8.72□□□□□ -1.01
LIMS2-210ENST00000413578 UCP3P55916 312 aa8.72□□□□□ -1.01
LIMS2-210ENST00000413578 BSXQ3C1V8 233 aa8.72□□□□□ -1.01
LIMS2-210ENST00000413578 ACTL10Q5JWF8 245 aa8.72□□□□□ -1.01
LIMS2-210ENST00000413578 UBE2NLQ5JXB2 153 aa8.72□□□□□ -1.01
LIMS2-210ENST00000413578 LPCAT3Q6P1A2 487 aa8.72□□□□□ -1.01
LIMS2-210ENST00000413578 GPX8Q8TED1 209 aa8.72□□□□□ -1.01
LIMS2-210ENST00000413578 METTL26Q96S19 204 aa8.72□□□□□ -1.01
LIMS2-210ENST00000413578 RPL5P46777 297 aaKnown RBP8.71□□□□□ -1.02
LIMS2-210ENST00000413578 KCTD21Q4G0X4 260 aa8.71□□□□□ -1.02
LIMS2-210ENST00000413578 TMEM69Q5SWH9 247 aa8.71□□□□□ -1.02
LIMS2-210ENST00000413578 ZNF767PQ75MW2 155 aa8.71□□□□□ -1.02
LIMS2-210ENST00000413578 OR4X1Q8NH49 305 aa8.71□□□□□ -1.02
LIMS2-210ENST00000413578 RAB40CQ96S21 281 aa8.71□□□□□ -1.02
LIMS2-210ENST00000413578 NDUFAF3Q9BU61 184 aa8.71□□□□□ -1.02
LIMS2-210ENST00000413578 YTHDF1Q9BYJ9 559 aaKnown RBP8.71□□□□□ -1.02
LIMS2-210ENST00000413578 APOBP04114 4563 aaKnown RBP8.7□□□□□ -1.02
LIMS2-210ENST00000413578 M0R2N4 97 aa8.7□□□□□ -1.02
LIMS2-210ENST00000413578 CORTO00230 105 aa8.7□□□□□ -1.02
LIMS2-210ENST00000413578 S100GP29377 79 aa8.7□□□□□ -1.02
LIMS2-210ENST00000413578 PRSS3P35030 304 aa8.7□□□□□ -1.02
LIMS2-210ENST00000413578 TGFBR1P36897 503 aa8.7□□□□□ -1.02
LIMS2-210ENST00000413578 SNCAP37840 140 aa8.7□□□□□ -1.02
LIMS2-210ENST00000413578 RND3P61587 244 aa8.7□□□□□ -1.02
LIMS2-210ENST00000413578 MLANAQ16655 118 aa8.7□□□□□ -1.02
LIMS2-210ENST00000413578 ZNF705AQ6ZN79 300 aaPredicted RBP8.7□□□□□ -1.02
LIMS2-210ENST00000413578 CENPSQ8N2Z9 138 aa8.7□□□□□ -1.02
LIMS2-210ENST00000413578 SAMD12Q8N8I0 201 aa8.7□□□□□ -1.02
LIMS2-210ENST00000413578 GLMPQ8WWB7 406 aa8.7□□□□□ -1.02
LIMS2-210ENST00000413578 NEU1Q99519 415 aa8.7□□□□□ -1.02
LIMS2-210ENST00000413578 PSMG4Q5JS54 123 aa8.69□□□□□ -1.02
LIMS2-210ENST00000413578 C16orf54Q6UWD8 224 aa8.69□□□□□ -1.02
LIMS2-210ENST00000413578 CROCCP3Q8IVE0 287 aa8.69□□□□□ -1.02
LIMS2-210ENST00000413578 SLC35G3Q8N808 338 aa8.69□□□□□ -1.02
LIMS2-210ENST00000413578 SEPSECSQ9HD40 501 aaKnown RBP8.69□□□□□ -1.02
LIMS2-210ENST00000413578 A0A0G2JRQ6 117 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 HELTA6NFD8 242 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 ZNF705FA8MVS1 300 aaPredicted RBP8.68□□□□□ -1.02
LIMS2-210ENST00000413578 H3BMM0 161 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 IGLC1P0CG04 106 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 ZNF705DP0CH99 300 aaPredicted RBP8.68□□□□□ -1.02
LIMS2-210ENST00000413578 ZNF705BP0CI00 300 aaPredicted RBP8.68□□□□□ -1.02
LIMS2-210ENST00000413578 RPS19P39019 145 aaKnown RBP8.68□□□□□ -1.02
LIMS2-210ENST00000413578 TSPAN5P62079 268 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 DHRS2Q13268 280 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 TIGITQ495A1 244 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 AARDQ4LEZ3 155 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 Q6ZRM9 215 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 ZNF575Q86XF7 245 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 TP53RKQ96S44 253 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 C1QTNF4Q9BXJ3 329 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 SCPEP1Q9HB40 452 aa8.68□□□□□ -1.02
LIMS2-210ENST00000413578 FAM90A26D6RGX4 464 aa8.67□□□□□ -1.02
LIMS2-210ENST00000413578 OPRK1P41145 380 aa8.67□□□□□ -1.02
LIMS2-210ENST00000413578 ETV6P41212 452 aa8.67□□□□□ -1.02
LIMS2-210ENST00000413578 SUB1P53999 127 aaKnown RBP eCLIP8.67□□□□□ -1.02
LIMS2-210ENST00000413578 NUTF2P61970 127 aaKnown RBP8.67□□□□□ -1.02
LIMS2-210ENST00000413578 LHFPL1Q86WI0 220 aa8.67□□□□□ -1.02
LIMS2-210ENST00000413578 TMEM230Q96A57 120 aa8.67□□□□□ -1.02
LIMS2-210ENST00000413578 ZNF486Q96H40 463 aaPredicted RBP8.67□□□□□ -1.02
LIMS2-210ENST00000413578 FAM210BQ96KR6 192 aa8.67□□□□□ -1.02
LIMS2-210ENST00000413578 XCL2Q9UBD3 114 aa8.67□□□□□ -1.02
LIMS2-210ENST00000413578 TRAV30A0A087WSZ9 112 aa8.66□□□□□ -1.02
LIMS2-210ENST00000413578 IFNA17P01571 189 aa8.66□□□□□ -1.02
LIMS2-210ENST00000413578 HNRNPCP07910 306 aaKnown RBP eCLIP8.66□□□□□ -1.02
LIMS2-210ENST00000413578 HLA-DRB4P13762 266 aa8.66□□□□□ -1.02
LIMS2-210ENST00000413578 NPY1RP25929 384 aa8.66□□□□□ -1.02
LIMS2-210ENST00000413578 RCVRNP35243 200 aa8.66□□□□□ -1.02
LIMS2-210ENST00000413578 HOXA1P49639 335 aaPredicted RBP8.66□□□□□ -1.02
LIMS2-210ENST00000413578 EIF2B2P49770 351 aaKnown RBP8.66□□□□□ -1.02
LIMS2-210ENST00000413578 AKR1C2P52895 323 aa8.66□□□□□ -1.02
LIMS2-210ENST00000413578 AP2S1P53680 142 aaPredicted RBP8.66□□□□□ -1.02
LIMS2-210ENST00000413578 YPEL3P61236 119 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms