RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 MORN5Q5VZ52 161 aa14.31□□□□□ -0.12
SDCBP-202ENST00000413219 RNF7Q9UBF6 113 aa14.31□□□□□ -0.12
SDCBP-202ENST00000413219 H0YJW9 148 aa14.3□□□□□ -0.12
SDCBP-202ENST00000413219 GLRXP35754 106 aa14.3□□□□□ -0.12
SDCBP-202ENST00000413219 BPIFB3P59826 476 aa14.3□□□□□ -0.12
SDCBP-202ENST00000413219 LCN12Q6JVE5 192 aa14.3□□□□□ -0.12
SDCBP-202ENST00000413219 EBLN2Q6P2I7 272 aa14.3□□□□□ -0.12
SDCBP-202ENST00000413219 LINC00479Q96M42 142 aa14.3□□□□□ -0.12
SDCBP-202ENST00000413219 C10orf113Q5VZT2 155 aa14.3□□□□□ -0.12
SDCBP-202ENST00000413219 GAFA1Q96PS6 74 aa14.3□□□□□ -0.12
SDCBP-202ENST00000413219 C7orf69Q9H7B7 122 aa14.3□□□□□ -0.12
SDCBP-202ENST00000413219 A0A1B0GXF2 115 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 A0A1W2PN81 502 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 C2orf70A6NJV1 201 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 SPRY3O43610 288 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 PTTG1IPP53801 180 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 ZNF833PQ6ZTB9 187 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 ATOH7Q8N100 152 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 OR10W1Q8NGF6 305 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 ZNF430Q9H8G1 570 aaPredicted RBP14.29□□□□□ -0.12
SDCBP-202ENST00000413219 ASCL3Q9NQ33 180 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 C1RLQ9NZP8 487 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 COX11Q9Y6N1 276 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 IGLV3-9A0A075B6K5 115 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 IGHV1-69-2A0A0G2JMI3 117 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 C3orf36Q3SXR2 165 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 FAM201AQ5SY85 155 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 ZNF738Q8NE65 137 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 OR2D3Q8NGH3 330 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 OR2T6Q8NHC8 308 aa14.29□□□□□ -0.12
SDCBP-202ENST00000413219 TRAV34A0A0B4J273 112 aa14.28□□□□□ -0.12
SDCBP-202ENST00000413219 NKX6-3A6NJ46 265 aa14.28□□□□□ -0.12
SDCBP-202ENST00000413219 CCL25O15444 150 aa14.28□□□□□ -0.12
SDCBP-202ENST00000413219 APOA2P02652 100 aa14.28□□□□□ -0.12
SDCBP-202ENST00000413219 PYYP10082 97 aa14.28□□□□□ -0.12
SDCBP-202ENST00000413219 MYCNOSP40205 109 aa14.28□□□□□ -0.12
SDCBP-202ENST00000413219 HINT1P49773 126 aaPredicted RBP14.28□□□□□ -0.12
SDCBP-202ENST00000413219 RPL8P62917 257 aaKnown RBP14.28□□□□□ -0.12
SDCBP-202ENST00000413219 UBE2V1Q13404 147 aa14.28□□□□□ -0.12
SDCBP-202ENST00000413219 MAJINQ3KP22 176 aa14.28□□□□□ -0.12
SDCBP-202ENST00000413219 DUX4L9Q6RFH8 374 aaPredicted RBP14.28□□□□□ -0.12
SDCBP-202ENST00000413219 ZNF788Q6ZQV5 615 aa14.28□□□□□ -0.12
SDCBP-202ENST00000413219 THAP8Q8NA92 274 aa14.28□□□□□ -0.12
SDCBP-202ENST00000413219 DSCAML1Q8TD84 2053 aa14.28□□□□□ -0.12
SDCBP-202ENST00000413219 TCRBV4S1A1TA0A5B7 111 aa14.27□□□□□ -0.12
SDCBP-202ENST00000413219 HIGD1CA8MV81 97 aa14.27□□□□□ -0.12
SDCBP-202ENST00000413219 CA7P43166 264 aa14.27□□□□□ -0.12
SDCBP-202ENST00000413219 TMEM177Q53S58 311 aa14.27□□□□□ -0.12
SDCBP-202ENST00000413219 Q56UQ5 140 aa14.27□□□□□ -0.12
SDCBP-202ENST00000413219 LEMD1Q68G75 181 aa14.27□□□□□ -0.12
SDCBP-202ENST00000413219 RNASEKQ6P5S7 137 aaKnown RBP14.27□□□□□ -0.12
SDCBP-202ENST00000413219 PATE2Q6UY27 113 aa14.27□□□□□ -0.12
SDCBP-202ENST00000413219 MUC15Q8N387 334 aa14.27□□□□□ -0.12
SDCBP-202ENST00000413219 OR4F17Q8NGA8 305 aa14.27□□□□□ -0.12
SDCBP-202ENST00000413219 OR4A5Q8NH83 315 aa14.27□□□□□ -0.12
SDCBP-202ENST00000413219 FXYD5Q96DB9 178 aa14.27□□□□□ -0.12
SDCBP-202ENST00000413219 SOX21Q9Y651 276 aaPredicted RBP14.27□□□□□ -0.12
SDCBP-202ENST00000413219 CACNA1GO43497 2377 aa14.27□□□□□ -0.12
SDCBP-202ENST00000413219 IGLC7A0M8Q6 106 aa14.27□□□□□ -0.13
SDCBP-202ENST00000413219 FSTL3O95633 263 aa14.27□□□□□ -0.13
SDCBP-202ENST00000413219 IGLL1P15814 213 aa14.27□□□□□ -0.13
SDCBP-202ENST00000413219 HES3Q5TGS1 186 aa14.27□□□□□ -0.13
SDCBP-202ENST00000413219 STXBP6Q8NFX7 210 aa14.27□□□□□ -0.13
SDCBP-202ENST00000413219 HARBI1Q96MB7 349 aa14.27□□□□□ -0.13
SDCBP-202ENST00000413219 KLF12Q9Y4X4 402 aa14.27□□□□□ -0.13
SDCBP-202ENST00000413219 DHRS13Q6UX07 377 aa14.26□□□□□ -0.13
SDCBP-202ENST00000413219 TMEM167AQ8TBQ9 72 aa14.26□□□□□ -0.13
SDCBP-202ENST00000413219 ZNF596Q8TC21 504 aa14.26□□□□□ -0.13
SDCBP-202ENST00000413219 TMEM70Q9BUB7 260 aa14.26□□□□□ -0.13
SDCBP-202ENST00000413219 hADV38S2A0JD32 116 aa14.26□□□□□ -0.13
SDCBP-202ENST00000413219 M0R1B8 84 aa14.26□□□□□ -0.13
SDCBP-202ENST00000413219 CRXO43186 299 aaPredicted RBP14.26□□□□□ -0.13
SDCBP-202ENST00000413219 PCP4P48539 62 aa14.26□□□□□ -0.13
SDCBP-202ENST00000413219 SUB1P53999 127 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■■■■□ 20.8
SDCBP-202ENST00000413219 CT83Q5H943 113 aa14.26□□□□□ -0.13
SDCBP-202ENST00000413219 TIMM23BQ5SRD1 257 aa14.26□□□□□ -0.13
SDCBP-202ENST00000413219 IGFL2Q6UWQ7 119 aa14.26□□□□□ -0.13
SDCBP-202ENST00000413219 EPDR1Q9UM22 224 aa14.26□□□□□ -0.13
SDCBP-202ENST00000413219 LINC00312Q9Y6C7 94 aa14.26□□□□□ -0.13
SDCBP-202ENST00000413219 TANC2Q9HCD6 1990 aa14.25□□□□□ -0.13
SDCBP-202ENST00000413219 TRAV17A0A0B4J275 112 aa14.25□□□□□ -0.13
SDCBP-202ENST00000413219 K7EP13 123 aa14.25□□□□□ -0.13
SDCBP-202ENST00000413219 HBBP68871 147 aa14.25□□□□□ -0.13
SDCBP-202ENST00000413219 UNQ5815/PRO19632Q6UWF5 114 aa14.25□□□□□ -0.13
SDCBP-202ENST00000413219 OR5AN1Q8NGI8 311 aa14.25□□□□□ -0.13
SDCBP-202ENST00000413219 CCL13Q99616 98 aa14.25□□□□□ -0.13
SDCBP-202ENST00000413219 MRPL20Q9BYC9 149 aaKnown RBP14.25□□□□□ -0.13
SDCBP-202ENST00000413219 IGKV1D-37A0A075B6S9 117 aa14.24□□□□□ -0.13
SDCBP-202ENST00000413219 GPR6P46095 362 aaPredicted RBP14.24□□□□□ -0.13
SDCBP-202ENST00000413219 SSBP2P81877 361 aaPredicted RBP14.24□□□□□ -0.13
SDCBP-202ENST00000413219 TNFAIP6P98066 277 aaPredicted RBP14.24□□□□□ -0.13
SDCBP-202ENST00000413219 PRR27Q6MZM9 219 aa14.24□□□□□ -0.13
SDCBP-202ENST00000413219 VSTM2AQ8TAG5 236 aa14.24□□□□□ -0.13
SDCBP-202ENST00000413219 CHCHD1Q96BP2 118 aaKnown RBP14.24□□□□□ -0.13
SDCBP-202ENST00000413219 SSBP4Q9BWG4 385 aaPredicted RBP14.24□□□□□ -0.13
SDCBP-202ENST00000413219 GAL3ST2Q9H3Q3 398 aa14.24□□□□□ -0.13
SDCBP-202ENST00000413219 FNDC4Q9H6D8 234 aaPredicted RBP14.24□□□□□ -0.13
SDCBP-202ENST00000413219 ST20Q9HBF5 79 aa14.24□□□□□ -0.13
SDCBP-202ENST00000413219 CAMPP49913 170 aa14.24□□□□□ -0.13
SDCBP-202ENST00000413219 PDPNQ86YL7 162 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms