RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 LINC00479Q96M42 142 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 CHCHD5Q9BSY4 110 aa4.27□□□□□ -1.73
HERC4-205ENST00000412272 LINC01548A6NM66 108 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 HSBP1O75506 76 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 NAPSAO96009 420 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 FXYD2P54710 66 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 FBXW4P57775 412 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 FAM57BQ71RH2 274 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 ZNF525Q8N782 197 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 MAFAQ8NHW3 353 aaPredicted RBP4.26□□□□□ -1.73
HERC4-205ENST00000412272 ARHGAP5-AS1Q96IT6 56 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 FBXL15Q9H469 300 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 SCN3AQ9NY46 2000 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 LY6LH3BQJ8 138 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 CSN1S1P47710 185 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 SPANXCQ9NY87 97 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 PCNTO95613 3336 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 TCF20Q9UGU0 1960 aaKnown RBP4.26□□□□□ -1.73
HERC4-205ENST00000412272 TRBV20OR9-2A0A075B6H5 130 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 IGKV1-8A0A0C4DH67 115 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 C9JCJ5 164 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 ZIC3O60481 467 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 DHRS3O75911 302 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 ZFAND5O76080 213 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 IGLV3-1P01715 115 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 CD3EP07766 207 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 EMDP50402 254 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 C1orf195Q5TG92 126 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 TEX36Q5VZQ5 186 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 RNF144BQ7Z419 303 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 PCSK5Q92824 1860 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 DPH3Q96FX2 82 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 SLC25A39Q9BZJ4 359 aaPredicted RBP4.26□□□□□ -1.73
HERC4-205ENST00000412272 LIME1Q9H400 295 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 ZNF286AQ9HBT8 521 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 EMC9Q9Y3B6 208 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 A1L4Q6 167 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 LINC01553A4QN01 128 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 SNRNP200O75643 2136 aaKnown RBP4.26□□□□□ -1.73
HERC4-205ENST00000412272 VWC2Q2TAL6 325 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 LINC01545Q5VT33 79 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 C3orf22Q8N5N4 141 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 TP53TG1Q9Y2A0 90 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 KLF12Q9Y4X4 402 aa4.26□□□□□ -1.73
HERC4-205ENST00000412272 LRRK1Q38SD2 2015 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 NXPH3O95157 252 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 CTXN1P60606 82 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 GNB1P62873 340 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 TESK1Q15569 626 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 TAL2Q16559 108 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 C3orf36Q3SXR2 165 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 COA3Q9Y2R0 106 aaPredicted RBP4.25□□□□□ -1.73
HERC4-205ENST00000412272 SIT1Q9Y3P8 196 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 OR1A2Q9Y585 309 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 MDFIC2A0A1B0GVS7 189 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 PRRG2O14669 202 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 WISP2O76076 250 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 MPV17P39210 176 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 ASIPP42127 132 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 FAM53BQ14153 422 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 HES1Q14469 280 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 GUSBP1Q15486 140 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 C9orf153Q5TBE3 101 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 ZAR1Q86SH2 424 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 TEN1Q86WV5 123 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 DLX4Q92988 240 aaPredicted RBP4.25□□□□□ -1.73
HERC4-205ENST00000412272 LINC00526Q96FQ7 95 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 C2orf48Q96LS8 159 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 TAC3Q9UHF0 121 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 PCDH15Q96QU1 1955 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 C3orf85A0A1B0GTC6 90 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 FAM90A20PA6NIJ5 464 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 PLA2G5P39877 138 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 PRDX1Q06830 199 aaKnown RBP4.25□□□□□ -1.73
HERC4-205ENST00000412272 C22orf39Q6P5X5 142 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 ZNF645Q8N7E2 425 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 C11orf52Q96A22 123 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 C6orf106Q9H6K1 298 aaPredicted RBP4.25□□□□□ -1.73
HERC4-205ENST00000412272 PYGO1Q9Y3Y4 419 aa4.25□□□□□ -1.73
HERC4-205ENST00000412272 COL5A1P20908 1838 aaPredicted RBP4.24□□□□□ -1.73
HERC4-205ENST00000412272 PTPRSQ13332 1948 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 IGKV1D-8A0A087WSZ0 117 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 RBAKDNA6NC62 111 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 SH2D7A6NKC9 451 aaPredicted RBP4.24□□□□□ -1.73
HERC4-205ENST00000412272 RRHO14718 337 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 HLA-DQA1P01909 254 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 RPL18Q07020 188 aaKnown RBP4.24□□□□□ -1.73
HERC4-205ENST00000412272 TMEM14EPQ6UXP3 125 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 SPACA3Q8IXA5 215 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 OR11H6Q8NGC7 330 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 TIMD4Q96H15 378 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 PTPRBP23467 1997 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 TDRD6O60522 2096 aaKnown RBP4.24□□□□□ -1.73
HERC4-205ENST00000412272 CGB1A6NKQ9 187 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 CHEK1O14757 476 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 LMX1BO60663 402 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 CST7O76096 145 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 IGKV1D-33P01593 117 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 IGKV1-33P01594 117 aa4.24□□□□□ -1.73
HERC4-205ENST00000412272 FAM90A13PP0C7W8 464 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms