RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 DEFB131BA0A096LNP1 70 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 MED14OSP0DP75 135 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 CRYBB3P26998 211 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TGFBR1P36897 503 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 P2RY1P47900 373 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 NEDD8Q15843 81 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 ZNF767PQ75MW2 155 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 POM121L12Q8N7R1 296 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 SLC35G3Q8N808 338 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 CSNK1G2-AS1Q8NCQ2 148 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 DCANP1Q8TF63 244 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 TMEM230Q96A57 120 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 CELA1Q9UNI1 258 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 DNAH17Q9UFH2 4485 aa10.28□□□□□ -0.76
HLA-DQB2-229ENST00000411527 M0R2N4 97 aa10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 CLN5O75503 358 aa10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 IFNA17P01571 189 aa10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 P0DMU3 169 aa10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 FAM231AP0DMU4 169 aa10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 FAM231CP0DMU5 169 aa10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 RPS19P39019 145 aaKnown RBP10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 SUB1P53999 127 aaKnown RBP eCLIP10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 UCP3P55916 312 aa10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 MLANAQ16655 118 aa10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 C12orf74Q32Q52 190 aa10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 GPX8Q8TED1 209 aa10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 NARS2Q96I59 477 aaKnown RBP10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 MRPL36Q9P0J6 103 aaKnown RBP10.27□□□□□ -0.77
HLA-DQB2-229ENST00000411527 MUC4Q99102 2169 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 A0A0B4J293 547 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 INS-IGF2F8WCM5 200 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 CORTO00230 105 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 RTL8CO15255 209 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 IGKV1-5P01602 117 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 AMBPP02760 352 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 RNASE2P10153 161 aaKnown RBP10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 ETV6P41212 452 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 DHRS2Q13268 280 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 RAB40CQ96S21 281 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 SCRT1Q9BWW7 348 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 Q9H521 79 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 FNDC4Q9H6D8 234 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 PKHD1P08F94 4074 aa10.26□□□□□ -0.77
HLA-DQB2-229ENST00000411527 SCGB2A1O75556 95 aa10.25□□□□□ -0.77
HLA-DQB2-229ENST00000411527 OPRK1P41145 380 aa10.25□□□□□ -0.77
HLA-DQB2-229ENST00000411527 HOXA1P49639 335 aaPredicted RBP10.25□□□□□ -0.77
HLA-DQB2-229ENST00000411527 EIF2B2P49770 351 aaKnown RBP10.25□□□□□ -0.77
HLA-DQB2-229ENST00000411527 AKR1C2P52895 323 aa10.25□□□□□ -0.77
HLA-DQB2-229ENST00000411527 TIGITQ495A1 244 aa10.25□□□□□ -0.77
HLA-DQB2-229ENST00000411527 PSMG4Q5JS54 123 aa10.25□□□□□ -0.77
HLA-DQB2-229ENST00000411527 OR4X1Q8NH49 305 aa10.25□□□□□ -0.77
HLA-DQB2-229ENST00000411527 NDUFAF3Q9BU61 184 aa10.25□□□□□ -0.77
HLA-DQB2-229ENST00000411527 PDCD10Q9BUL8 212 aa10.25□□□□□ -0.77
HLA-DQB2-229ENST00000411527 DYNC1H1Q14204 4646 aaKnown RBP10.25□□□□□ -0.77
HLA-DQB2-229ENST00000411527 SMIM31A0A1B0GVY4 71 aa10.24□□□□□ -0.77
HLA-DQB2-229ENST00000411527 HELTA6NFD8 242 aa10.24□□□□□ -0.77
HLA-DQB2-229ENST00000411527 PGAM2P15259 253 aa10.24□□□□□ -0.77
HLA-DQB2-229ENST00000411527 PI3P19957 117 aa10.24□□□□□ -0.77
HLA-DQB2-229ENST00000411527 NPY1RP25929 384 aa10.24□□□□□ -0.77
HLA-DQB2-229ENST00000411527 KCTD21Q4G0X4 260 aa10.24□□□□□ -0.77
HLA-DQB2-229ENST00000411527 SNX29P2Q8IUI4 249 aa10.24□□□□□ -0.77
HLA-DQB2-229ENST00000411527 ENY2Q9NPA8 101 aa10.24□□□□□ -0.77
HLA-DQB2-229ENST00000411527 XCL2Q9UBD3 114 aa10.24□□□□□ -0.77
HLA-DQB2-229ENST00000411527 TRAV30A0A087WSZ9 112 aa10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 M0QYG6 137 aa10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 IGKV1-17P01599 117 aa10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 P0C879 139 aa10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 RCVRNP35243 200 aa10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 RPL5P46777 297 aaKnown RBP10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 AP2S1P53680 142 aaPredicted RBP10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 RND3P61587 244 aa10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 NUTF2P61970 127 aaKnown RBP10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 LSM3P62310 102 aaKnown RBP10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 LCE2DQ5TA82 110 aaPredicted RBP10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 TP53RKQ96S44 253 aa10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 C1QTNF4Q9BXJ3 329 aa10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 SCPEP1Q9HB40 452 aa10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 U3KQE9 123 aa10.23□□□□□ -0.77
HLA-DQB2-229ENST00000411527 ATG12O94817 140 aa10.22□□□□□ -0.77
HLA-DQB2-229ENST00000411527 PIGPP57054 158 aa10.22□□□□□ -0.77
HLA-DQB2-229ENST00000411527 LGALS9BQ3B8N2 356 aa10.22□□□□□ -0.77
HLA-DQB2-229ENST00000411527 C16orf54Q6UWD8 224 aa10.22□□□□□ -0.77
HLA-DQB2-229ENST00000411527 Q8WTZ3 238 aa10.22□□□□□ -0.77
HLA-DQB2-229ENST00000411527 GLMPQ8WWB7 406 aa10.22□□□□□ -0.77
HLA-DQB2-229ENST00000411527 ZNF486Q96H40 463 aaPredicted RBP10.22□□□□□ -0.77
HLA-DQB2-229ENST00000411527 COMMD3Q9UBI1 195 aa10.22□□□□□ -0.77
HLA-DQB2-229ENST00000411527 C3orf85A0A1B0GTC6 90 aa10.21□□□□□ -0.77
HLA-DQB2-229ENST00000411527 IFNA10P01566 189 aa10.21□□□□□ -0.77
HLA-DQB2-229ENST00000411527 IFNA21P01568 189 aa10.21□□□□□ -0.77
HLA-DQB2-229ENST00000411527 HNRNPCP07910 306 aaKnown RBP eCLIP10.21□□□□□ -0.77
HLA-DQB2-229ENST00000411527 SNRPD3P62318 126 aaKnown RBP10.21□□□□□ -0.77
HLA-DQB2-229ENST00000411527 SP6Q3SY56 376 aa10.21□□□□□ -0.77
HLA-DQB2-229ENST00000411527 DNAH11Q96DT5 4516 aa10.21□□□□□ -0.78
HLA-DQB2-229ENST00000411527 ABCA13Q86UQ4 5058 aa10.21□□□□□ -0.78
HLA-DQB2-229ENST00000411527 PKD1P98161 4303 aa10.21□□□□□ -0.78
HLA-DQB2-229ENST00000411527 A0A0G2JRQ6 117 aa10.2□□□□□ -0.78
HLA-DQB2-229ENST00000411527 RPS10-NUDT3A0A1W2PQS6 291 aa10.2□□□□□ -0.78
HLA-DQB2-229ENST00000411527 FAM90A26D6RGX4 464 aa10.2□□□□□ -0.78
HLA-DQB2-229ENST00000411527 H3BMM0 161 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms