RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ELOA3CA0A087WX78 387 aaPredicted RBP10.91□□□□□ -0.66
LIMS1-205ENST00000410093 TCRBV4S1A1TA0A5B7 111 aa10.91□□□□□ -0.66
LIMS1-205ENST00000410093 CGB1A6NKQ9 187 aa10.91□□□□□ -0.66
LIMS1-205ENST00000410093 C9JCJ5 164 aa10.91□□□□□ -0.66
LIMS1-205ENST00000410093 CRYGCP07315 174 aa10.91□□□□□ -0.66
LIMS1-205ENST00000410093 SOD3P08294 240 aa10.91□□□□□ -0.66
LIMS1-205ENST00000410093 C8orf88P0DMB2 117 aa10.91□□□□□ -0.66
LIMS1-205ENST00000410093 KCNIP4Q6PIL6 250 aa10.91□□□□□ -0.66
LIMS1-205ENST00000410093 SEPSECSQ9HD40 501 aaKnown RBP10.91□□□□□ -0.66
LIMS1-205ENST00000410093 DNAJC4Q9NNZ3 241 aa10.91□□□□□ -0.66
LIMS1-205ENST00000410093 A0A1W2PPI3 338 aa10.9□□□□□ -0.66
LIMS1-205ENST00000410093 A0A1W2PRE2 83 aa10.9□□□□□ -0.66
LIMS1-205ENST00000410093 IGLC7A0M8Q6 106 aa10.9□□□□□ -0.66
LIMS1-205ENST00000410093 A6NNC1 897 aa10.9□□□□□ -0.66
LIMS1-205ENST00000410093 AP4M1O00189 453 aa10.9□□□□□ -0.66
LIMS1-205ENST00000410093 GNB1P62873 340 aa10.9□□□□□ -0.66
LIMS1-205ENST00000410093 MRGPRG-AS1Q2M3A8 158 aa10.9□□□□□ -0.66
LIMS1-205ENST00000410093 MINOS1Q5TGZ0 78 aa10.9□□□□□ -0.66
LIMS1-205ENST00000410093 TRGV9Q99603 122 aa10.9□□□□□ -0.66
LIMS1-205ENST00000410093 MINOS1-NBL1R4GNA1 71 aa10.9□□□□□ -0.66
LIMS1-205ENST00000410093 MALRD1Q5VYJ5 2156 aa10.9□□□□□ -0.67
LIMS1-205ENST00000410093 IGKV1OR2-108A0A075B7D4 117 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 IGHV2-5P01817 119 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 EFNA4P52798 201 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 LCN2P80188 198 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 TNXAQ16473 311 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 LINC00518Q8N0U6 118 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 ZFP82Q8N141 532 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 TMEM116Q8NCL8 245 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 NPBQ8NG41 125 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 C2CD4CQ8TF44 421 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 SLC25A33Q9BSK2 321 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 CREBBPQ92793 2442 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 TRAV9-1A0A075B6T8 112 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 ODF3BA8MYP8 253 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 C22orf46C9J442 243 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 NDUFB4O95168 129 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 FABP1P07148 127 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 PFN1P07737 140 aaKnown RBP10.89□□□□□ -0.67
LIMS1-205ENST00000410093 ATP5G3P48201 142 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 UBE2G2P60604 165 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 C16orf82Q7Z2V1 217 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 LINC01551Q86U37 167 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 OR51G1Q8NGK1 321 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 ACY3Q96HD9 319 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 SRD5A3Q9H8P0 318 aa10.89□□□□□ -0.67
LIMS1-205ENST00000410093 F11RQ9Y624 299 aaKnown RBP10.89□□□□□ -0.67
LIMS1-205ENST00000410093 PSMB11A5LHX3 300 aa10.88□□□□□ -0.67
LIMS1-205ENST00000410093 E7EUB6 86 aa10.88□□□□□ -0.67
LIMS1-205ENST00000410093 COX7A2P2O60397 106 aa10.88□□□□□ -0.67
LIMS1-205ENST00000410093 CXCL1P09341 107 aa10.88□□□□□ -0.67
LIMS1-205ENST00000410093 NPPCP23582 126 aa10.88□□□□□ -0.67
LIMS1-205ENST00000410093 COX7A1P24310 79 aa10.88□□□□□ -0.67
LIMS1-205ENST00000410093 GALR1P47211 349 aa10.88□□□□□ -0.67
LIMS1-205ENST00000410093 SNRPEP62304 92 aaKnown RBP10.88□□□□□ -0.67
LIMS1-205ENST00000410093 KIAA0141Q14154 515 aaPredicted RBP10.88□□□□□ -0.67
LIMS1-205ENST00000410093 URGCP-MRPS24S4R325 110 aa10.88□□□□□ -0.67
LIMS1-205ENST00000410093 TEX15Q9BXT5 2789 aa10.87□□□□□ -0.67
LIMS1-205ENST00000410093 TGIF2-C20orf24A0A0A6YYL0 155 aa10.87□□□□□ -0.67
LIMS1-205ENST00000410093 EIF3GO75821 320 aaKnown RBP eCLIP10.87□□□□□ -0.67
LIMS1-205ENST00000410093 NDUFA3O95167 84 aa10.87□□□□□ -0.67
LIMS1-205ENST00000410093 MOSP00540 346 aa10.87□□□□□ -0.67
LIMS1-205ENST00000410093 DEFA4P12838 97 aa10.87□□□□□ -0.67
LIMS1-205ENST00000410093 FAM3BP58499 235 aaPredicted RBP10.87□□□□□ -0.67
LIMS1-205ENST00000410093 FOXL1Q12952 345 aa10.87□□□□□ -0.67
LIMS1-205ENST00000410093 C10orf113Q5VZT2 155 aa10.87□□□□□ -0.67
LIMS1-205ENST00000410093 ZNF343Q6P1L6 599 aa10.87□□□□□ -0.67
LIMS1-205ENST00000410093 MIR17HGQ75NE6 70 aa10.87□□□□□ -0.67
LIMS1-205ENST00000410093 OR2T6Q8NHC8 308 aa10.87□□□□□ -0.67
LIMS1-205ENST00000410093 NPIPB3Q92617 1050 aa10.87□□□□□ -0.67
LIMS1-205ENST00000410093 TBL2Q9Y4P3 447 aaKnown RBP10.87□□□□□ -0.67
LIMS1-205ENST00000410093 ITPR2Q14571 2701 aa10.87□□□□□ -0.67
LIMS1-205ENST00000410093 MDFIC2A0A1B0GVS7 189 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 PPP5D1E7EU14 171 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 NBR2O15453 112 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 OR7C2O60412 319 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 GGCTO75223 188 aaKnown RBP10.86□□□□□ -0.67
LIMS1-205ENST00000410093 TYMSP04818 313 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 S100A9P06702 114 aaKnown RBP10.86□□□□□ -0.67
LIMS1-205ENST00000410093 AKR1D1P51857 326 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 PLP1P60201 277 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 ARF6P62330 175 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 RPL19P84098 196 aaKnown RBP10.86□□□□□ -0.67
LIMS1-205ENST00000410093 PLGLAQ15195 96 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 S100A7AQ86SG5 101 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 OR2T10Q8NGZ9 312 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 SRSF12Q8WXF0 261 aaKnown RBP10.86□□□□□ -0.67
LIMS1-205ENST00000410093 PERPQ96FX8 193 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 RITA1Q96K30 269 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 FNDC4Q9H6D8 234 aaPredicted RBP10.86□□□□□ -0.67
LIMS1-205ENST00000410093 YTHDF2Q9Y5A9 579 aaKnown RBP10.86□□□□□ -0.67
LIMS1-205ENST00000410093 ADGRG4Q8IZF6 3080 aa10.86□□□□□ -0.67
LIMS1-205ENST00000410093 IGHV3-72A0A0B4J1Y9 119 aa10.85□□□□□ -0.67
LIMS1-205ENST00000410093 SMIM6P0DI80 62 aa10.85□□□□□ -0.67
LIMS1-205ENST00000410093 C10orf55Q5SWW7 151 aa10.85□□□□□ -0.67
LIMS1-205ENST00000410093 SPATA31B1PQ5VZV4 182 aa10.85□□□□□ -0.67
LIMS1-205ENST00000410093 LURAP1LQ8IV03 231 aa10.85□□□□□ -0.67
LIMS1-205ENST00000410093 TMEM37Q8WXS4 190 aa10.85□□□□□ -0.67
LIMS1-205ENST00000410093 CFHR4Q92496 578 aa10.85□□□□□ -0.67
LIMS1-205ENST00000410093 SFRP2Q96HF1 295 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms